Peribacillus sedimenti: V1500_05625
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Entry
V1500_05625 CDS
T11238
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pesi Peribacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pesi03400
]
V1500_05625 (addB)
Enzymes [BR:
pesi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1500_05625 (addB)
DNA repair and recombination proteins [BR:
pesi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
V1500_05625 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
XNY93304
LinkDB
All DBs
Position
1100447..1103944
Genome browser
AA seq
1165 aa
AA seq
DB search
MSLRFLLGRSGTGKTSTILDEIRTRLDENPDGNPIIYLVPEQMTFLSEYKLITSPGLAGM
IRTQVYSFTRLAWRVLQETGGMSRMHLDSVGVNMLIRKIMEEKKGDLKMFRRSAEKQGFI
AQLEEMLTEFKRYCITPEQLREQNKDNPGESDEGLQDKLNDLEVIYQAFEDELIGKYLDS
EDYFRLLVEKMADSPYIASADIYIDGFYSITPQELMIVEELMKRAKNVTISLTLDQPYKT
HPPDPLNLFRQTGTMYHSVYTAAERLVISRDEDIILQEKPRFEQSKSLDHLETNFNIRPA
RKFDGATDVTISPAVNRRAEIEGIARHILQLVRDEGYRWRDIAILLRNGEAYHDNIRTIF
KDYQIPIFIDAKRSMLNHPLIELIRSTLEILLTNWRYEPVFRAIKTELLYPINRNASKVR
QQVDRFENYVLSRGISGNKWSSKERWGYRRIRGLELVERAQTEQERRMEDEVNDLKQMFS
EPIMRLSRRLKRAVSGREFCEALYLYLEELHVPEKLDKLKLQAEDEGDLVLAREHEQSWD
AVIGLLDQFVEMLSGEKITLRTFQTIIETGLESLTFSLVPPAIDQVLIANLDLSRLDDVK
AAFVIGLNEGVLPGRAASDGILSDNDRNSLLKEGFEVAPDSRTRLLDEEFTAYKAFTTPS
TKLYLSYPLADEEGKTLIPSTYIKRVCEVLPNAAEFVYMGDPSDLPAEQQVHFAANYDVA
LSYLAAQLQLKKRNYPIHPLWWDVYNAYMDDDRYKATAARVLSSLFYQNQTKQLSQDTSK
KLYGDHILASVSRMEMFNSCPFSHFVAHGLKLQDRKIFRLDAPDIGEMFHGALKLISDYL
HQNKIAWSSLTKDQCMVLAKEAVEQLAPKLQNQILLSTNRHHYLKRKLENVIARASMVLS
EHAKASGFSPIGLELGFGKDGQLPPLTFTLKNGTKMELIGRIDRVDQAEQDGGVYLRVLD
YKSSEKDLNVSEVYYGLALQMLTYLDIVITHSQSLVGKEALPAGVLYFHVHNPIVNSNGL
IGMDEIEKAIYKSFKMKGLILGEPDVIGLMDNGLERDKNNSSDIIPAGFKKDGSLQASSQ
IASKDEFALLKNHVRDAYQRAGDAIVDGNVDITPFKLKEKTPCTFCSYKSVCQFDQSLEE
NQFKNLSPKKQNDILEILRAEAVKS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcgttttttactgggcaggtcaggaacaggaaaaacgtccactatattggat
gagatccgtacaaggcttgatgaaaatcctgatggaaatccaatcatttatctagttccc
gagcagatgacatttttatctgaatataaattaataactagccccggtcttgcgggaatg
atccgtacacaggtgtacagcttcacacggcttgcctggcgcgtgctgcaggaaacaggc
ggtatgagccgaatgcatctggacagtgtcggcgttaatatgcttatccggaaaatcatg
gaagaaaagaagggtgacctgaagatgttcaggcgttccgctgaaaaacagggcttcatt
gcccagctggaggaaatgctcaccgaatttaaaaggtattgcataacccccgagcagctt
agggaacagaacaaagataatcctggtgaatcggacgaagggctccaggataaattgaat
gacctggaagtcatttatcaagcatttgaagatgagcttatcggcaagtaccttgattcg
gaagattatttcaggcttcttgtggaaaagatggctgactccccgtatattgcttcggcc
gatatttatatagacggattctacagcattactcctcaggagctgatgatcgttgaagaa
ttaatgaaacgtgccaagaatgtgacaatatccttgacgctggaccagccctacaaaacc
caccctccggaccctttaaacttattccgccagaccggaaccatgtatcacagcgtttat
acagcggcggaaaggctggtaattagtcgggacgaggatatcatcctgcaggaaaaaccc
cggtttgaacaaagcaaaagcctggaccatctggaaactaatttcaacataaggcccgcc
aggaaatttgatggagcaactgatgtgacgatttctcctgcggtcaatagaagggctgag
atagaagggatagcacgccatattctgcagcttgtcagggatgaaggctaccgctggcgc
gacattgccatcctgctgcgaaacggcgaggcttatcatgataatatccgtacaatattc
aaagattatcagattcctatattcattgatgcgaaacgctctatgctgaatcatccgctg
atagagttgattagatcaacccttgagattcttctgaccaattggcggtatgagcctgtt
tttcgtgcgattaaaacggagctgctttatccaatcaatcggaatgcaagtaaagtgaga
cagcaggtagaccgctttgaaaactatgttctttcaagggggatatcagggaataagtgg
tcttccaaagagcgatggggatacaggcgcatcagggggcttgagcttgtggaacgggcc
cagacagagcaggagaggcgcatggaggatgaagttaacgaccttaaacagatgttcagt
gaacccattatgcgtctatcccgcagattaaagcgtgcggtgagtggacgggagttttgt
gaagcgctatacctgtaccttgaagagctgcatgtaccggaaaaattggacaagctgaag
ctccaggctgaagacgaaggagatttggttttagccagggagcatgagcagtcatgggat
gcggtaattggccttctggatcagtttgtagaaatgctcagcggagaaaagataacgcta
aggacctttcaaaccatcatagagaccggattggagtcattgacattttcgctggttcct
cctgcgatagaccaggtactcattgccaatttggacttgtctcgcctggatgatgtcaag
gcggcatttgtgattggcctgaatgagggggtcttgcccggaagagctgcctcggacggg
atattatccgataacgacaggaatagtctcttaaaagaagggtttgaggtggcacctgat
tcccgtacaaggctgcttgacgaagagtttactgcctataaggcgtttactactccttct
acaaaattgtatctttcgtatcctcttgctgacgaagaaggaaagactctgattccgtca
acgtatatcaagcgtgtttgtgaggtactgccaaacgccgcggaattcgtgtatatgggc
gatccatcagacttgccggcagaacagcaggttcattttgctgccaattatgatgtggca
ctatcctatttagctgcacagctgcagctgaagaaacgaaattatccaattcaccctcta
tggtgggatgtgtataacgcatatatggatgatgaccggtacaaagctacagcggcccgt
gtattgtccagcctcttttaccagaatcagacgaagcagctatcacaggatacaagcaag
aaattatatggagaccatatactggcgagtgtatccaggatggaaatgttcaatagttgt
ccattttctcattttgtagcccatggcttaaagctgcaggatcgtaaaatattccggctg
gatgcaccggatataggtgaaatgttccacggcgcattaaagcttatttcggactattta
catcaaaataagatagcctggtcctcgttgacaaaagaccaatgtatggtgcttgcaaag
gaagcagtcgaacagcttgcgccgaagttgcagaaccagattctcttaagcacgaaccgc
caccattacctaaaaagaaaattggagaatgtcattgcaagggcatccatggtgctgagc
gaacatgctaaggcaagcggattttctccaattggattggaattgggcttcgggaaagac
ggccagctccctccgctcacctttacattgaaaaacgggacaaaaatggagcttatcgga
cgcattgaccgtgttgatcaagccgagcaagatggcggagtatatcttagagtattggat
tacaagtcgagtgaaaaggatttgaatgtcagtgaagtatactatggtttggcacttcag
atgctcacctatctggacattgtcatcactcattcacaatcccttgtcggcaaggaagca
ttgccggctggtgtgctatacttccatgtccataatcctattgtgaactctaatggctta
attggcatggatgaaatcgagaaggccatttataaaagctttaaaatgaaaggcctcatt
cttggcgaaccggatgttatcgggttaatggacaatgggttggaacgtgacaagaataat
tcttcggatatcattccagccggctttaaaaaggatggcagccttcaggctagctcccag
attgccagcaaggacgagttcgcactgctgaaaaatcatgtgagagatgcctatcaaaga
gcaggggacgccattgtagatggcaatgtggacatcacgccatttaagctgaaggaaaag
acaccgtgcaccttttgttcttataaatcagtctgccagttcgatcaatcgctggaagaa
aatcaatttaaaaacctgtcacctaaaaaacagaatgatattttggaaattttgagagcg
gaggcagtcaagtcatga
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