Peribacillus sedimenti: V1500_09560
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Entry
V1500_09560 CDS
T11238
Name
(GenBank) penicillin-binding protein
KO
K08724
penicillin-binding protein 2B
Organism
pesi Peribacillus sedimenti
Pathway
pesi00550
Peptidoglycan biosynthesis
pesi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V1500_09560
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pesi01011
]
V1500_09560
Peptidoglycan biosynthesis and degradation proteins [BR:
pesi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
V1500_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Beta-lactamase2
PBP_dimer_2
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
XNY94038
LinkDB
All DBs
Position
1938829..1941018
Genome browser
AA seq
729 aa
AA seq
DB search
MQKKKNMKSGAAILFLIFGLLFFVLIGRFFYIQVSGKAGGEVLAARLDNKYQKQRVLEAN
RGSILDRKGEVIAEDTSSYSLVAILSKTVTTNPKKPNHVVDPEKTAEKLAKYLDMDEEDI
YKRLTKKGAFQVEFGTAGRDLSHEVKQKIEELKLPGLKFDRDTKRFYPNGIFASHLIGYV
EKDGSQTVGKLGLERYLNSYLKETDGLLKYDSDSWGLLLPNTKEKVKPQKNGNDVMLSLD
KKIQTFLEDSVSKVQEKYDPEEIIAIVSNPKTGEILAMAQRPTFHPQTKEGLTNTWHNLA
VEESFEPGSTMKIFTLAAAVQEGKFDPNATYVTGTYPVVGTKPVKDHSGIEPGKTVTFLE
GVQMSSNVAFATLAMNRIGADRFREYLTSFGFEKKTGIDLPNEVVGKIQYKYQRDKVSTS
FGQGSAITPIQQIQAVSAVANNGKMMRPYVVREIRDANTHKLIKETKPLVAGQPISAETA
KKVREYLGTVITAEHGTGKKYKIDGYEVAGKTGTAQIAGPGGFYLPGAKNNYLYSFMGMA
PKDDPQLVIYVAVKQPKLSATEVGADPLSEIFNPVMKSSLQYLDIKPTNLKTKEVEQVSD
YRGETVQAAVQELKNLGYKSVVIGKGSTVADQSPKTGSVMIAGERVIIKTDGDMTAPDMS
GWSLRDVMKAATLTGLDLNTAGSGYVTKQNLKPGKVIKPGDYCIVELTEPAEIAKQQNEL
KQKEEEVHD
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaagaaaaatatgaagtcaggagcagcgatattatttctaatattcggcctg
ctcttttttgtcttaattggccgcttcttttatattcaggtatcaggaaaagctggcggc
gaggtgcttgctgcgagactggacaataaatatcaaaaacagcgggtccttgaagcgaac
cgcggcagcattcttgatagaaagggcgaggtcattgcagaagacacctcttcctactcg
ctggttgcgattttgtccaaaactgtcacaacaaatcccaaaaaacccaatcatgtggta
gatccggaaaagaccgccgaaaagttggccaagtatctggatatggacgaagaggatatc
tataaaaggctgaccaaaaaaggtgctttccaggtggaattcggaacagcgggaagggat
ttgtcccacgaagtaaaacagaagattgaagaactgaagctgcctgggctaaagtttgat
cgtgatacaaagaggttctatcctaatggaatctttgcctctcatttgattggctatgta
gaaaaggatggaagccagacagtaggcaagcttgggctggaaagatatttgaacagctac
ttaaaagagacggacggccttttgaaatacgatagtgattcttgggggctattgcttcca
aatacaaaagaaaaagtcaaaccacagaaaaatggaaacgatgtaatgctttccctggat
aaaaaaatacagaccttccttgaggactctgtcagcaaggtacaggaaaaatatgatcca
gaagaaatcattgccattgtctccaatccaaaaaccggtgaaatacttgcaatggcacag
cggccgacattccatccgcaaaccaaggaaggcctgacgaacacctggcataacctggct
gtggaagaaagctttgaaccgggatcgacaatgaagatttttacactggcagcggcggta
caggaggggaaatttgatcctaatgccacctatgtgacggggacatatcctgttgtcggc
acaaagccggtaaaggatcacagtggaatcgaacctggaaagacagttacatttctcgaa
ggcgtgcagatgtcttccaatgtagcctttgcgacacttgcgatgaaccgcatcggagcg
gaccgttttagagaatatttaaccagctttggctttgaaaagaagacaggcattgacctg
cctaatgaagttgtgggtaaaatccaatataaatatcagcgggataaagtttctacctct
ttcggccaagggagtgccattacaccaatccagcagattcaagctgtctctgcggtcgcg
aataatgggaaaatgatgcgtccgtatgtggtaagagaaatacgggatgcgaatacacac
aagctgatcaaggaaacaaaaccgctggtggccgggcagccgatttctgcagagaccgcc
aaaaaagtccgcgagtatcttggaacggtcattacggcggagcatggaacgggcaaaaaa
tataagattgatggctatgaggtggccggaaaaacagggaccgcgcaaatagcagggcca
ggcggtttctatctgccgggagccaaaaacaattatctatattcctttatgggaatggcg
ccaaaggatgacccgcagctggtcatatatgtcgcggtaaaacagccaaagctatccgct
acggaagtgggggcggatccgttgtctgaaatctttaaccctgtcatgaaaagcagcctc
caatatttagacattaagccgaccaacttaaaaacgaaagaagttgaacaggtttcagat
tatagaggcgaaactgttcaggctgccgtacaggagctcaaaaaccttggctataagtca
gttgtgattggaaaaggaagcactgttgctgaccagtccccgaaaacgggcagtgtaatg
attgcgggtgagcgggttatcattaaaacagacggcgatatgacagcaccagatatgtct
ggctggtcccttagagacgtgatgaaggcagctaccctgacaggccttgaccttaatact
gcgggcagcggatatgtcacaaagcaaaatctaaaaccaggtaaagtaataaagcctggt
gattactgcatagttgaattaaccgaacctgcagagattgcaaagcaacaaaacgagctg
aaacaaaaagaagaagaagtacacgattga
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