Peribacillus sedimenti: V1500_09580
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Entry
V1500_09580 CDS
T11238
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi00470
D-Amino acid metabolism
pesi00550
Peptidoglycan biosynthesis
pesi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V1500_09580 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V1500_09580 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pesi01011
]
V1500_09580 (murD)
Enzymes [BR:
pesi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
V1500_09580 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pesi01011
]
Precursor biosynthesis
Amino acid ligase
V1500_09580 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
Mur_ligase
Pyr_redox_3
PTS_IIB
Motif
Other DBs
NCBI-ProteinID:
XNY94042
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All DBs
Position
1946383..1947735
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AA seq
450 aa
AA seq
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MKQTTKYTNKKILVLGLAKSGVTAASLLHKLGAFVTVNDMKPLSENPAAQGLLEQGIKVI
CGSHPIDLLDEGFELIVKNPGIPYRNPMVQGAMEKGIPVITEVELAYQISEAPFVAITGT
NGKTTTTTLIYEMLKEGGKLPLIAGNIGTVASGVAEEATGDNTIVIELSSFQLMGIDEFT
PEIAVMTNLFDAHLDYHSSRDEYKWAKANITKNQTEGQYFIYNADQEEVADMARQSRAEL
VPFSSLNKHESGACVEDGQVMFRGEPIVATVDIALPGQHNLENILAAVSAAKLKGVSNQA
IRSVLATFHGVKHRLQYVATIENRRFFNDSKATNILAASKALSSFNEPVILLAGGLDRGN
EFDELKPFLKKVKALISFGQTAEKIERVAKEAGITQIKRVDNVEKAVPEAFALSEEGDCI
LLSPACASWDQYKTFEVRGDMFMDAVHRLK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcagacaacaaaatacacaaataaaaaaatattggttctagggctggctaaaagc
ggcgttaccgcagcttcccttctacataaactaggggcctttgtaacagtgaacgatatg
aagccactgtctgaaaatccggcggcacaaggtttgctggagcaagggataaaagtcatt
tgcggaagccatccaatcgacctgcttgatgaaggttttgagctgatcgtcaaaaatcca
ggtattccttaccgaaacccaatggtacagggagcaatggagaagggcatacctgttata
actgaagtggagctggcgtaccaaataagcgaagctccatttgttgcgatcactggaacg
aacgggaaaactacaacgactaccttaatctatgagatgctaaaggaaggcggcaagctt
cctttgattgccgggaacattggaacggtggcatccggcgtggccgaggaggcaactggc
gataatacgatcgtgattgagctatcttcgttccagctcatgggaatagatgagttcaca
ccggaaatcgccgtgatgacgaatctgtttgatgcccatctcgattatcatagttcaagg
gatgaatataaatgggccaaggcaaacatcaccaaaaaccagacggaaggccagtatttc
atttacaatgcagaccaggaggaagtagcggatatggctcgccaaagccgagccgagcta
gtgccgttttcttcgttgaataagcatgaaagtggtgcctgcgtcgaggatggacaggtt
atgttccgcggtgagccaattgtggcgacagtggatatagcgctgccaggccagcataat
cttgaaaacatacttgctgccgtgtcagcggctaagttaaaaggtgtatcaaatcaagct
atccgatcggttctggcaaccttccatggtgtcaagcatcgcctgcaatatgtggccaca
attgaaaaccgaagattttttaatgattctaaagcgaccaatatcctggccgcatcgaaa
gccctgtcttcttttaacgaaccagtgatccttcttgcaggcggactggaccgagggaat
gaattcgatgaactgaaaccattcctgaaaaaggtcaaagcacttatatcctttggccag
actgcagaaaaaattgaacgggttgcaaaagaagcaggaataactcaaataaaacgtgtc
gataatgtggaaaaggcagttccagaagcgttcgccctctctgaagaaggcgactgcatt
ctcctctctccggcctgtgcaagctgggaccagtataaaactttcgaggtaagaggagac
atgtttatggatgctgtgcatagactgaaataa
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