Peribacillus sedimenti: V1500_10185
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Entry
V1500_10185 CDS
T11238
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pesi Peribacillus sedimenti
Pathway
pesi02020
Two-component system
pesi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V1500_10185
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V1500_10185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pesi03021
]
V1500_10185
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pesi02035
]
V1500_10185
Transcription machinery [BR:
pesi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V1500_10185
Bacterial motility proteins [BR:
pesi02035
]
Flagellar system
Flagellar assembly proteins
Stator
V1500_10185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
HTH_23
DUF1492
UBA_2
DUF6272
Motif
Other DBs
NCBI-ProteinID:
XNY94160
LinkDB
All DBs
Position
2070030..2070794
Genome browser
AA seq
254 aa
AA seq
DB search
MSYMNTEEEQLHWKNWIDCRDPQAGDILAKKYLPLVSYHVQRISVNLPKNVSRDDIKSLG
MMGLFNALERFEPSRDLKFDTYASFRIRGAILDGLRKEDWLPRSSREKAKRIEAVTEELE
QKYMRNISPKEVADTMGITEEEVYSALNENFFANILSMDEHPQDQEDKEGNFHIKDDKAM
LPEEELVREELYNDLARVIETLNEKEQLVLQLFYKEELTLTEIGQVMNLSTSRISQIHSR
AIHKLRNLLQAAFN
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatatgaatactgaagaagagcagctgcactggaaaaattggatagactgtcgg
gatcctcaggccggtgacattttagccaaaaagtatttaccgcttgtttcctatcatgtt
caaagaatttcagtcaacctgcctaaaaatgtaagccgtgatgatatcaaaagtctggga
atgatgggattgttcaacgcgttggagcgtttcgagccaagtcgcgatttgaaatttgat
acatatgcatctttcaggatccggggcgccatactagatggacttcgtaaggaagattgg
cttccgagaagttcaagggaaaaagcaaagagaattgaagcagtaactgaagaactggaa
caaaaatatatgaggaatatttcaccgaaggaagtagcagatacaatggggattacagaa
gaggaagtgtattcggccctgaatgaaaatttctttgccaatatcctttctatggacgaa
catccacaggatcaggaagacaaagaagggaacttccatataaaagacgataaggcaatg
cttcctgaggaagagcttgtcagggaagaactatataatgatctggcacgggtcattgaa
acacttaatgaaaaagaacagcttgtgttgcagcttttctataaggaagaactaaccctc
acagaaattgggcaggttatgaatctatcgacttcaagaatttcacaaatacattcgagg
gcaattcacaaattaaggaacttgctgcaagccgcctttaactaa
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