Peribacillus sedimenti: V1500_11345
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Entry
V1500_11345 CDS
T11238
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
pesi Peribacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pesi03012
]
V1500_11345 (selB)
Translation factors [BR:
pesi03012
]
Eukaryotic type
Elongation factors
V1500_11345 (selB)
Prokaryotic type
V1500_11345 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
Beta-barrel_SelB
WHD_3rd_SelB
GTP_EFTU_D2
SRPRB
MMR_HSR1
WHD_2nd_SelB
aSelB_III
DUF2610
HTH_19
Motif
Other DBs
NCBI-ProteinID:
XNY94356
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All DBs
Position
2296222..2298102
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AA seq
626 aa
AA seq
DB search
MKKHFTIGMAGHIDHGKTSLTKALTKVDTDRLKEEKERQISIELGFAPLYEDDQMEVSVI
DVPGHERFIRQMIAGVAGIDLVVLVVAADEGVMPQTKEHLEILQFLGVKKGIVAITKMDR
VDEDFLSLVQEEIILELEGSIFEDSPVILVDSLSGKGIDELQRLILNELDQLESRDATGA
FRLPIDQVFTVKGQGTIVRGTVYEGSAIEGQALLILPKKIETRARQVQVHHKPAQAAYAG
QRTAINLSGITKDQIERGDVLVSSEQFFVTNCVDISLKMVKDLEHPVKHRMPVKCHIGTS
EVMGKIVFFDRNEVIKEQNEILCQLCLDEHVVTKRGDRFIIRRPSPQETIGGGWVIDPAG
AKYRFGERTIEELEKKREGTPEERVMETLVKFKGLSEKELLSRTSVDMHSLVEILDKQGF
ICYSPGHYTHIQVTEKISDEILDQITRFQQLNPMRQGMNKAEILQTLQLVYPKPLLEYVL
ETGEANGIWIRKGTFLSLPDFTPHIPNNWRKRVEGLLASLKSDQMQVRHLTDYLDESGIP
DAIKTELIFYLQEQNVIVPLDDKYYVHHDIFDDAVTRLKTATSTSFEVSDAKEVLGLSRK
YMIPFLEALDSKKLTARQDGKRVWLA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcattttactattggcatggccggtcatattgaccatgggaaaacgtccctt
accaaggccttaacgaaagtcgatacagacaggcttaaagaggagaaggagcgtcaaatt
tcaattgagctcggttttgctccactttatgaagatgaccagatggaagtgtccgttatc
gatgtgccaggacatgaaagatttattcgtcagatgatagccggggtagccgggatcgat
cttgtagtcctggttgttgcggctgatgagggtgtaatgccccaaacaaaagaacatctg
gaaattttgcaatttcttggcgtgaaaaaagggattgtcgccatcacaaaaatggatcgt
gtggatgaagatttcctttctctggtccaggaagaaatcatattggaacttgaaggcagt
atctttgaagactctccagttatattggttgatagtctttccggaaaaggtattgatgaa
ttacaaaggctcatacttaatgaacttgatcagcttgaatcgagggatgcaaccggcgca
ttcaggcttccgattgaccaggtatttacagtaaaagggcaggggacaattgtaagaggg
acggtatatgaaggatctgccattgaaggacaggccttgctcattttaccgaaaaagatt
gagaccagggcaagacaggtccaggtgcaccataaaccagcccaagcggcatatgccggc
caacggacagccataaatctttctggcataacgaaagatcaaatagagcgcggtgatgtc
cttgtctcctcagagcaattttttgtcacaaattgtgttgatatttctttaaagatggtt
aaagacttagagcatccagtgaagcacagaatgccggttaaatgccatatcggaacctct
gaggtcatgggaaaaattgtgttttttgaccggaatgaagtaattaaggagcaaaatgaa
attctatgccagctgtgtcttgatgaacatgttgttacgaaaaggggagacagattcatt
atccgccggccaagtccccaggaaactataggaggagggtgggtgattgatcctgcgggt
gcgaaataccgttttggcgaacgtaccattgaggaattggaaaagaaaagagaagggaca
cctgaagaaagggttatggaaacattagtgaaattcaagggactttccgaaaaagagctt
ctttcccgaacttccgtcgacatgcattcacttgttgaaatactggataaacagggcttc
atttgctattcccctggtcattatactcatatccaagttactgaaaaaatcagcgacgaa
attttagaccaaattacgagattccagcagcttaatccaatgaggcaagggatgaacaaa
gcagaaatactacaaacgttacaactggtttatccaaagccattattggaatatgtatta
gagactggagaagcaaatggcatatggattagaaagggtacattcctgtccctgcctgac
tttaccccgcatataccaaacaattggagaaagcgtgtggaaggattgcttgcctctcta
aagagcgaccaaatgcaggttcggcaccttactgattatttggatgaatcaggtatccca
gatgcaataaagacagaattaatattttatctccaggaacaaaatgtcatagttcctttg
gatgacaaatattatgtccaccatgacatttttgatgatgctgttacgagattaaaaact
gctacgagtacatctttcgaagtaagcgacgcaaaagaagtgctcggtctttccaggaaa
tatatgattccttttttggaggctttggatagcaaaaaacttacagctcgacaagacggc
aaacgtgtttggctagcatag
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