Peribacillus sedimenti: V1500_17180
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Entry
V1500_17180 CDS
T11238
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
pesi Peribacillus sedimenti
Pathway
pesi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
V1500_17180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pesi03400
]
V1500_17180
DNA repair and recombination proteins [BR:
pesi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
V1500_17180
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
Spectrin_SESTD1
MutS_III
Motif
Other DBs
NCBI-ProteinID:
XNY90973
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Position
complement(3493399..3495324)
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AA seq
641 aa
AA seq
DB search
MNQKALHTLQFTKIKEIIGSFSLTETGRQRILAIEPSINPGQIQALQSELDEAVLLLKKS
ASVPLSALEGIESILQLLNKGVALRPEHFMRLHQFLDSCIKIKRYMKDKEYIAPRVTSYV
HSISSLPDLSAEIHRCIRNGIIDDNASRELGKIRKQIAIHKERLKGKLENLIKSPKIKSM
LQETIISERSGRYVIPLKKEFKGKIKGAILDSSASGSTIFVEPEESAALQAEIDILAWQE
EAEGERILSYLTGLVETHQQELKLAVETMVHYDVLFSKAKYSISINGRAPKVNTSHFISI
KGARHPLLENGAVPLNVELGNGEHALVITGPNTGGKTVAIKTIGLITLMAQSGFHIPVEE
GTHIAIFQNIWVDIGDGQSIEQNLSTFSSHIKNIITILEETNDRSLVLLDELGSGTDPAE
GMGLATVILEQLYKKGATLLATTHYSEIKHFADITPGFLNGSMEFDLETLRPTYKLIIGK
GGDSQGFSIALKLGMHPGLIEKAHKITYKEERSYPIRIEGQQQKLKLDKQITINRYMSRE
GGKIAKGESEIHFTQGDNVKLSPNNETGIIFKGPDDYGNYEVLVKGEMRKVNTKRLSLYI
AAADLYPKDYDMAQIFDSKENRKKSKLMNKRHVEGLTIEHE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaaggctttacacacattacaatttactaagatcaaagaaataattggctct
ttttcattaactgaaactggaaggcaaagaattttagcgatagagccgagcataaacccc
gggcagatccaggcacttcaatcagagctggatgaagctgtactgctgttaaaaaagagt
gcgagcgtaccgctttccgcattggaaggaattgaatccatcctacagctgctcaacaag
ggcgttgcactccgaccggaacattttatgaggcttcatcagtttcttgatagctgcata
aaaattaaacggtacatgaaagacaaggaatatattgctcccagggtaacgagttatgtc
catagcatcagttcacttcctgacctcagtgcggaaatccatagatgtattcgcaatggt
attattgatgataatgctagccgggagctgggcaaaattagaaaacaaattgccattcat
aaagaaaggctgaagggaaaactggaaaatcttataaaatccccgaaaattaaaagcatg
ctgcaggaaacaattatcagtgagagaagtggaagatatgtcatccctttgaaaaaggaa
tttaaaggaaaaataaagggggcaatattggactcatcagcatcgggctctaccattttt
gtggagccggaagagtctgcagccctgcaggcagaaatcgatatattggcatggcaggaa
gaggcggaaggggaaagaattcttagctatttgactgggcttgtggaaacacaccagcag
gagttgaagctggccgtggaaacgatggtacattatgatgttttattttctaaagcgaaa
tacagcatttcgataaacggaagagctcccaaagttaatacctctcatttcatttcaatc
aagggtgcgagacatccgcttctggagaatggggcagtgccgctgaacgtggagcttgga
aatggagagcatgccctggtcatcaccgggccgaatacaggcggaaagaccgttgccatt
aaaacgattgggctcattacgttaatggcacaatcaggcttccatatcccggtagaagaa
gggactcacattgcgatattccaaaatatttgggtagatataggtgatgggcaaagtata
gaacaaaatttaagcacgttcagctcgcatataaaaaatattatcacaatacttgaggaa
accaatgaccggagcctggtgctgcttgacgaactgggttcgggcacagaccctgcagag
gggatggggctggcaactgtcattctggagcagttatataaaaagggggcaacattgctt
gcgactacccattacagcgaaattaaacatttcgcagatataacaccaggctttctgaac
ggctcaatggaattcgatctggaaactttacggcctacctacaaattgatcattggcaag
gggggcgatagccagggcttctcaatcgctcttaaactgggcatgcatccgggcttaatt
gaaaaagcgcataagatcacctataaggaagaaagatcgtatccaatcagaatagagggc
caacagcagaagctaaagcttgataaacaaatcacgatcaataggtatatgagtcgggaa
ggagggaaaattgcaaagggtgaaagtgagatacattttacccagggagataatgtgaag
ctttctcctaataatgaaactggaattatttttaaaggtcctgatgattatgggaattat
gaagtcctcgtgaaaggagaaatgaggaaggtcaacaccaaaaggctcagcctgtacatt
gcggcggccgatctatatcccaaggattatgatatggcccaaatttttgatagtaaagag
aatcgaaaaaaatcaaagttaatgaataaacgtcatgtagaaggcctcacaatagaacat
gagtaa
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