Peribacillus sedimenti: V1500_18105
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Entry
V1500_18105 CDS
T11238
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pesi Peribacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pesi03032
]
V1500_18105
03036 Chromosome and associated proteins [BR:
pesi03036
]
V1500_18105
03400 DNA repair and recombination proteins [BR:
pesi03400
]
V1500_18105
DNA replication proteins [BR:
pesi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
V1500_18105
Chromosome and associated proteins [BR:
pesi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
V1500_18105
DNA repair and recombination proteins [BR:
pesi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
V1500_18105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Rpf1_C
HU-DNA_bdg
HU-CCDC81_euk_1
DUF6927
DUF8007
Motif
Other DBs
NCBI-ProteinID:
XNY91142
LinkDB
All DBs
Position
complement(3689912..3690184)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELINAVAETGELSKKDATKAVDAVFDTILDALKNGDKVQLIGFGNFEVRERAARKG
RNPQTGDEIEIAASKVPAFKPGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacagaactaattaacgcagttgcagaaacaggagagctttccaagaaagat
gcaacgaaagctgttgatgctgtttttgatacaatcttagacgctttgaaaaatggtgat
aaggtacagcttatcggttttggtaactttgaagttcgcgaacgcgcagcccgcaaaggc
cgcaatccgcaaactggcgatgaaatcgaaatcgctgcaagcaaagtgcctgctttcaaa
ccaggtaaagcacttaaagatgctgtaaagtaa
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