Peribacillus sedimenti: V1500_18720
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Entry
V1500_18720 CDS
T11238
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
V1500_18720 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pesi03400
]
V1500_18720 (xseA)
Enzymes [BR:
pesi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
V1500_18720 (xseA)
DNA repair and recombination proteins [BR:
pesi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
V1500_18720 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF5113
RecJ_OB
DUF2026
COG2_N
Motif
Other DBs
NCBI-ProteinID:
XNY91256
LinkDB
All DBs
Position
complement(3812339..3813694)
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AA seq
451 aa
AA seq
DB search
MDQDNYLSVSALTKYIRRKFDADPHLQNMYVRGEISNFKQHSSGHMYFTLKDEKARLLAV
MFSANSASLKFKPENGMKVLLRGDITVYEQSGQYQIYVKAMSPDGVGDLYLAYEQLKKKL
EQKGLFSPRHKKPLPVYPKTVGIITSPTGAALRDILITVKRRYPVVNIIIYPALVQGNNA
AKSIARAISIANERKEADVLIAGRGGGSIEELWAFNEEIVAETIFDSAIPIISAVGHETD
FTIADFVADLRAPTPTGAAELAVPHMNEILERIMNRKNLLTRSMQEIVNIESTKLGRLEK
SYAFRYPRKMYEQKLEQLDKGMERLKRESRRYFLKKNDSIQTLTAALKKQHPHENIERVK
ESLERHKKTLNRLMENNLRTNTRNFVQMTSTLSALSPLKIMERGYGLVFTDQEQLIKSTE
QVSIGENIVVQVKDGNLHCEVRDIKERKSND
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggacaactatttaagtgtcagtgctcttacaaaatatatcaggagaaaattt
gatgcagacccccatcttcaaaacatgtatgtacggggtgaaatttcaaattttaaacaa
cattccagcgggcatatgtatttcacgctgaaggatgagaaggcccgcttgcttgcagtc
atgttttccgccaatagtgcatcgcttaaattcaagcccgaaaacggcatgaaggtgctt
ctcaggggcgatataaccgtctatgagcaaagcggccagtatcagatatatgtgaaggcg
atgtccccagatggagtgggggatttatatttggcctatgagcagcttaagaaaaaactg
gaacaaaaaggattgttttcgccgcgccataaaaaacctttgcctgtttacccgaaaact
gtcggcattattacatccccgactggagcggcactgcgggatatcttaataacggtcaaa
aggcgctatccggtagtaaatatcataatctatccggcattggtccaggggaataatgcg
gcgaaatctattgccagagcaatttccatagccaatgaacgaaaagaagcggatgtcttg
atagccgggcgcgggggaggctctattgaagaattatgggcatttaatgaagaaatagta
gcagaaacgatttttgattcagcgataccgatcatttccgcagtaggacacgaaacggac
tttacaatcgctgattttgtagctgatttaagggcgccaacacctaccggggcggcagag
cttgcagtaccgcacatgaatgagattctcgaaagaataatgaatcgaaaaaacctgttg
accaggtccatgcaggagattgtaaatattgaaagcacgaagcttggcaggctggagaaa
tcgtatgcctttcgttatccgcggaagatgtatgagcaaaaactagagcagcttgataag
gggatggagaggcttaaacgagaaagccgccgctatttcctgaaaaaaaatgatagtatt
caaaccttgacggctgctctaaaaaaacagcatccgcatgaaaatattgagagagtaaag
gaatctcttgaaaggcataaaaaaacgcttaaccgcttaatggagaataatctgcgaaca
aatacgaggaattttgtgcaaatgacttctaccctgtcagcactcagtcctcttaaaatc
atggagcggggatatgggcttgtttttactgaccaggagcagctgattaaaagtacggag
caagtgtctataggcgaaaatatcgtcgttcaggtaaaggatggcaatcttcactgcgaa
gtccgagatataaaggagagaaaaagcaatgactaa
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