Peribacillus sedimenti: V1500_19120
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Entry
V1500_19120 CDS
T11238
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
pesi Peribacillus sedimenti
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pesi03019
]
V1500_19120
03009 Ribosome biogenesis [BR:
pesi03009
]
V1500_19120
Enzymes [BR:
pesi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
V1500_19120
Messenger RNA biogenesis [BR:
pesi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V1500_19120
Ribosome biogenesis [BR:
pesi03009
]
Prokaryotic type
rRNA helicases
V1500_19120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
XNY91332
LinkDB
All DBs
Position
complement(3884004..3885317)
Genome browser
AA seq
437 aa
AA seq
DB search
MTTNNFERFQLKSYIIDAVNTLGFPKPTEIQERVIPAVLKGTSLIGQSQTGTGKTHSYLL
PIMNKIDPEKEEVQAIISAPTRELANQIYKEALKIADHFPEESPIQVKLYIGGTDKQRTI
EKLKNQPQLVIGTPGRIKDLVVEQALHVFSATMLVVDEADLMLDMGFIEDVDITAARMAQ
DIQMLVFSATIPEKLKPFLKKYMENPKHVQVDPMKAAAENIDHVLVPLRHRSKIQLLNDM
LVAYNPYLAIVFTNTKKMAEEVADALNEKGLRVGRLHGDLSPRERKKMMKQINDLEYQFI
VATDLAARGIDIEGVSHVINFELPSDLDFYIHRTGRTARAGYSGIAATIYETSDEDALNR
LEKMGITFRNTDLQKGEWVEADERNKRQNRKKQENEIDKMAKKHVKKPGKVKPGYKKKLQ
RDMESYKKRQRRLQNKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaataattttgaaaggtttcagcttaaaagctatattatagacgctgtaaat
acactgggcttcccaaaaccgacagaaatccaggaaagggtcatacctgccgttctgaaa
ggaaccagtcttattggacagtcacagactggtacaggcaagacccactcctacttgctt
ccaatcatgaataagatcgatccggagaaagaggaagttcaagcgatcatcagtgctccg
acaagggaactggcaaaccaaatctataaagaagcgttaaagattgcggaccattttcca
gaagagtctcctatccaagtaaaattgtatataggagggactgataaacagaggactatt
gaaaagctgaaaaaccagccgcaattggtaattggtactcctgggagaataaaagacctg
gttgttgaacaggcgctgcatgtgttttccgccaccatgcttgtcgtggacgaagccgac
cttatgcttgatatgggcttcattgaagatgtggatataacggcagcaagaatggcacag
gatattcaaatgcttgtattttcggcaacaattccagaaaagcttaagccgtttttgaaa
aaatatatggaaaacccaaagcatgtacaggtagacccgatgaaagcagctgcagaaaat
atagatcatgttttggttccattgcgtcatcggagtaaaatccagctgctgaatgatatg
cttgtggcatacaatccatatttggccatagtttttacgaacacgaagaagatggcggaa
gaggtcgctgatgcactgaatgaaaaaggtttaagggttggcaggcttcatggagatttg
agccctcgtgaaagaaagaaaatgatgaagcaaattaatgatttagaatatcaatttatt
gtggctacagatcttgcggctcgtggtattgatatagaaggagtcagccatgtgataaac
tttgagctgccttcagaccttgatttttacattcatagaactggcaggactgcacgcgct
gggtactccggcattgctgcgaccatttatgagacatcagatgaggatgctctaaaccgg
ttggaaaaaatgggaatcacattccgcaacacagatctccaaaaaggagaatgggttgaa
gctgatgagcggaataaacgccaaaaccgcaaaaagcaggagaatgaaatagataaaatg
gctaagaagcatgtcaaaaaacctggcaaagttaagcctggctataaaaagaagctgcag
cgggatatggaaagctataaaaagagacagcgtcgcctgcagaataagaaatag
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