Peribacillus sedimenti: V1500_19530
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Entry
V1500_19530 CDS
T11238
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V1500_19530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pesi03400
]
V1500_19530
Enzymes [BR:
pesi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V1500_19530
DNA repair and recombination proteins [BR:
pesi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V1500_19530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_22
nSTAND3
AAA_16
AAA_5
NPHP3_N
T2SSE
DEAD
AAA
Folliculin_C
AAA_28
AAA_17
AAA_12
TsaE
NTPase_1
ABC_tran
AAA_18
UvrD_C
Glyco_hydro_38N
Motif
Other DBs
NCBI-ProteinID:
XNY91412
LinkDB
All DBs
Position
complement(3963340..3965763)
Genome browser
AA seq
807 aa
AA seq
DB search
MAQQDSFDLFSEDKLFMKGRHLVTVFHNEQNMYSVVRIRVDETNINYEESEAVVTGYFPR
IHEHETYIFYGQMKDHPRFGLQFHVEHFRKDMPQSKDGIINYLSSELFKGIGKKTAQGIV
EALGENAISKILEQPSLLDSIPKLTPEKAKGLYDTLVEHQGLEQIMVALNEYGFGPQLAM
KIYQTYKHETLNVVQSNPYKLVEDIEGIGFGRADELGYQLGISGSHPDRIKAACLYCLDS
QCMQEGNVYLEADQLLELVKKLLEDNKRDRIEFQEISDEVIKLGEEGKIIVDERRIYPPS
LYFSEKGIVSNIKRILSQTEYESQFPESEFLLALGELEERLGVEYAPAQKEAIQTALQSP
MLILTGGPGTGKTTVIKGIVELYSELHGISMDINDYKNEDDPFPFVLAAPTGRAAKRMSE
STGLPAVTIHRLLGWNGSEGFSYDEDNPINGRLVIIDEVSMVDTWLAHQLLKALPEHVQV
IFVGDEDQLPSVGPGQVLKDLIESECIPTVALDQIYRQADGSSIIELAHEIKKGRIPEGV
DRQQADRSFIRCSTAQISQVVEKVVENARKKGFSARDIQVLAPMYKGPAGIDSLNKMLQE
VLNSNAEEKRREIKFGELIYRTGDKVLQLVNQPESGVFNGDMGEIVSIIFAKENTDNVDK
VIISFEGIEVTYTRQDLMQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLIYTAI
TRSKNFLILCGEEEALRMGVERNNESQRKTTLVAKVKEALGGPAESKSVVMVVKEAEPRD
YYSLLMNTDPLIGMENVSPYDFMEKNS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
ttggctcagcaggattcatttgatttattttccgaagataagttatttatgaagggcagg
catctggtgactgtttttcacaatgaacaaaatatgtattccgttgtccgaatccgcgtg
gacgaaacgaatattaattatgaagaaagtgaagctgttgtcacaggctacttccctcgg
attcatgaacatgaaacgtatattttctatgggcaaatgaaggaccatccgcgctttggg
ctgcaattccacgtagaacattttcgaaaggacatgccccaatcgaaggacggaatcatt
aattatttatccagtgagctattcaaagggattggtaaaaagactgcacaggggattgtc
gaagcactaggggaaaatgcgatttcgaagattttggaacagccatccctgcttgacagc
ataccaaagctgactccggaaaaagcaaaaggcctgtatgatacattagttgaacaccag
ggtctggaacagataatggttgcgttgaatgaatacggatttggaccgcagcttgccatg
aaaatttaccagacatacaagcatgaaacactgaatgttgtccagtccaatccatataag
ctcgtcgaggatatcgaaggtataggatttggaagggctgatgagcttggatatcaattg
ggtatatcaggaagccacccagatcgtatcaaggctgcctgtctttactgtctggactcg
cagtgtatgcaagaggggaatgtatatctggaagcagatcaattgctcgagcttgtgaaa
aagctattggaagacaataaacgggataggatcgagtttcaggaaatttctgatgaagta
ataaagcttggtgaggaaggaaaaatcattgtagacgagaggaggatttatcctccttcc
ctttacttttcagagaagggaatcgtctctaatattaagcggatcctttcccagacagaa
tacgaaagccagtttcctgaatccgaattcctgcttgcgctgggagagctggaggaacgg
ctcggtgtggagtatgcacccgcacaaaaagaagcaatccagactgcacttcagtctccc
atgctcatcctgacgggcgggccgggaaccgggaaaactacagttatcaaagggattgtt
gagctctatagtgaacttcatgggatatcaatggatataaatgattataaaaacgaggac
gacccctttccgttcgttcttgctgctcctacaggaagggctgcgaagcggatgtccgaa
tccacagggctgcctgccgtgaccatccacaggctccttggctggaatggcagtgaaggc
ttttcatatgatgaggataatcccatcaatggccggcttgtcataattgacgaggtatcc
atggttgatacatggcttgcgcatcagctgctcaaggcacttccggaacatgttcaggta
atttttgtaggagatgaggaccagctcccatctgtcggtcctgggcaggtattaaaggat
ttgattgaatcagaatgtattcctacggttgcactggaccaaatctaccgtcaggctgat
ggatcctcgattatcgagctagcccatgaaatcaaaaagggacgtattcccgaaggtgtg
gatagacagcaggccgaccgttctttcattcgctgcagcaccgcccaaatctcgcaggta
gtggaaaaggttgtggaaaatgcccgaaagaagggattttctgcacgggatattcaggta
cttgcaccaatgtacaagggccctgccggcatcgacagcttaaataagatgcttcaggaa
gtgctaaacagcaacgctgaagaaaaaaggcgcgagataaaattcggagagctgatttac
agaacgggagataaggttttgcagctggtgaatcagcctgagagcggcgtctttaacggc
gatatgggtgaaatagtatccattatctttgccaaagaaaataccgataatgttgataag
gtgattatctcgtttgagggaatagaagtcacctatacaaggcaggacctcatgcaaatc
acgcatgcttactgctgcagcatccataaatcacaaggatccgaatttccgatcgtgatt
ttgccggtcgtcaagagctattatcgcatgcttagaagaaaccttatctacacagctatc
acgaggagcaaaaacttcctcattctgtgcggcgaggaagaggccctccggatgggggtt
gaaagaaataatgaatcgcagagaaaaacaaccctggtggcaaaagtgaaagaagcactg
ggagggccggcagaatctaaatcagtggtaatggttgtaaaagaggcagaacctagagac
tactattccttgttaatgaataccgaccctttgatcgggatggaaaatgtatcaccctat
gattttatggaaaagaattcttaa
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