Peribacillus sedimenti: V1500_19935
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Entry
V1500_19935 CDS
T11238
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi00860
Porphyrin metabolism
pesi01100
Metabolic pathways
pesi01110
Biosynthesis of secondary metabolites
pesi01120
Microbial metabolism in diverse environments
pesi01240
Biosynthesis of cofactors
Module
pesi_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
pesi_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
V1500_19935 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pesi04147
]
V1500_19935 (hemB)
Enzymes [BR:
pesi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
V1500_19935 (hemB)
Exosome [BR:
pesi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
V1500_19935 (hemB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF3502
Motif
Other DBs
NCBI-ProteinID:
XNY91487
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All DBs
Position
complement(4057227..4058210)
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AA seq
327 aa
AA seq
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MNNLQFNRHRRLRNTAGMRALVRETYLHKEDLIYPIFIIDGNGVKNEVTSMPGVFQISLD
YLKAEMEEVSSLGIPSVILFGVPHEHDKDEQGTGAYCHNGLVQEATRQIKKDFPEIVVIA
DTCLCEYTSHGHCGVVENGKILNDESLELLVKTAISQAEAGADIIAPSNMMDGFVAAIRA
GLDEAGYQDIPVMSYAVKYASAFYGPFREAANGAPQFGDRKTYQMDYANRLEAFREAESD
VNEGADFLIVKPALSYLDIVRDVKNNFTLPVVAYNVSGEYSMIKAAAQNGWIDEKSIVME
MLTSMKRAGADLIITYFAKDVAGWLND
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcttcaattcaatcgtcaccgccgtttgcggaatactgccggtatgagggca
ttagtccgggaaacgtatcttcataaagaagacttgatttatccgatcttcattatcgat
ggaaatggtgtaaaaaatgaagtaacctccatgcctggagtatttcaaatttcattggat
tatttaaaggctgagatggaagaggtcagcagccttggcataccatctgttatcttattt
ggtgtccctcatgagcatgacaaggatgagcaaggaactggcgcttactgccataatggt
ttggtacaggaagcaacacgccagattaaaaaggactttccagagattgtcgttatcgct
gatacttgcttatgtgaatatacaagccatggacattgcggggtcgtcgaaaatggcaaa
atcctaaacgatgagtcacttgaacttcttgtaaaaacagctatcagccaggctgaggca
ggggcagatattatcgcaccgtccaacatgatggatggtttcgtcgcagcaatccgtgcc
gggctggatgaggccggatatcaggatatcccggtcatgtcttatgcagttaagtatgca
tcagccttctacggaccatttagagaagcggctaatggagctccccagttcggggaccgc
aaaacataccagatggattatgcaaataggctggaggctttccgcgaagctgaatcagat
gttaatgaaggagcggatttcctgattgttaagcctgcactgtcctacttggatattgtt
cgtgacgtgaagaataattttaccctgccagtagttgcgtataatgtcagcggtgaatat
tccatgatcaaagcagcagcccagaacggatggattgatgaaaaatcaatagtcatggag
atgctgacaagcatgaagcgcgcaggagcagatttaatcatcacttattttgcaaaagat
gtggcgggctggctaaacgactga
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