Peribacillus sedimenti: V1500_20095
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Entry
V1500_20095 CDS
T11238
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi00020
Citrate cycle (TCA cycle)
pesi00190
Oxidative phosphorylation
pesi00650
Butanoate metabolism
pesi00720
Other carbon fixation pathways
pesi01100
Metabolic pathways
pesi01110
Biosynthesis of secondary metabolites
pesi01120
Microbial metabolism in diverse environments
pesi01200
Carbon metabolism
Module
pesi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pesi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
V1500_20095 (sdhB)
00650 Butanoate metabolism
V1500_20095 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
V1500_20095 (sdhB)
00720 Other carbon fixation pathways
V1500_20095 (sdhB)
Enzymes [BR:
pesi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
V1500_20095 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4
Fer4_16
Fer4_4
Fer4_21
Fer4_3
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
XNY91518
LinkDB
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Position
complement(4089984..4090751)
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AA seq
255 aa
AA seq
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MTETLTRTVRFVITRQDTPESAPYTEEFELPYRPNMNVISALMEIRRNPVNVKGEKTIPI
AWDMNCLEEVCGACSMIINGKPRQSCTALIDKLEQPIHLEPMRTFPVVRDLQVDRSRMFD
SLKKVKAWIPIDGTYNLGPGPRMPEKKRQWAYELSKCMTCGVCLEACPNVNSNSDFIGPA
PLSQVRLFNAHPTGAMNQGERLNAIMGDGGLANCGNSQNCVQSCPKGIPLTTSIAALNRA
TTLQSFRNFFGSDEV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgactgagacattaacaagaacagtacgttttgtaatcactcgacaggatacacctgaa
tcggccccttatacagaggaatttgaattaccataccgccctaatatgaacgtcatttcc
gcgcttatggaaattcgccgaaaccctgtaaatgtaaagggagagaaaactattccaatc
gcctgggacatgaactgtcttgaagaggtatgtggagcttgttccatgatcataaacggg
aagccaaggcaatcatgtactgcattgattgacaaattggaacagccaatccaccttgag
ccaatgcgtacattcccggtggtccgcgatcttcaggtagaccgcagccgtatgtttgat
tccttgaagaaggtaaaagcatggataccgattgatggtacctataatcttggaccaggg
cctcgtatgccggaaaagaagcgccaatgggcatatgagctttccaagtgtatgacttgt
ggtgtgtgccttgaagcctgcccgaacgttaacagcaattcagacttcattgggccggca
ccgctttctcaggttcgtttgttcaatgcacatccaacaggggcaatgaaccaaggcgag
cgcttgaacgcaatcatgggtgacggagggcttgcaaactgcggtaattctcaaaactgt
gtgcaatcatgccctaaaggcataccgttgactacttcaatcgctgctctaaaccgagcg
acaacactgcagtccttccgcaatttctttggcagtgacgaagtataa
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