Peribacillus sedimenti: V1500_20100
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Entry
V1500_20100 CDS
T11238
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi00020
Citrate cycle (TCA cycle)
pesi00190
Oxidative phosphorylation
pesi00650
Butanoate metabolism
pesi00720
Other carbon fixation pathways
pesi01100
Metabolic pathways
pesi01110
Biosynthesis of secondary metabolites
pesi01120
Microbial metabolism in diverse environments
pesi01200
Carbon metabolism
Module
pesi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pesi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
V1500_20100 (sdhA)
00650 Butanoate metabolism
V1500_20100 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
V1500_20100 (sdhA)
00720 Other carbon fixation pathways
V1500_20100 (sdhA)
Enzymes [BR:
pesi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
V1500_20100 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
FAD_oxidored
AlaDh_PNT_C
DAO
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
XNY91519
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Position
complement(4090755..4092512)
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AA seq
585 aa
AA seq
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MGKGKIIVVGGGLAGLMATIKAAEAGQQVELFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPYIHFDDTVYGGDFLANQPPVKAMCEAAPSIIHMFDRMGVMFNRTPEGLLDFRRFGGTQ
HHRTAFAGATTGQQLLYALDEQVRRYEVDGLVTKFEGWEFLGAVVDEEQICRGVVAQNLQ
SMEIKSFAGDAVIMASGGPGIIFGKSTNSIINTGSAASIVYQQGATYANGEFIQIHPTAL
PGDDKLRLMSESARGEGGRVWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVSQK
LGINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFMGEDPRKVPMKIFPAVHYSMGGLWV
DYDQMTNIKGLFAAGECDYSQHGANRLGANSLLSAIYGGMVAGPNAVKYINGLEKSSDSV
SSSVFDNAVKEQEEKWNHIMSLNGTENAYILHKELGEWMTDNVTVVRYNDKLLQTDQKIQ
ELLERYENININDTARWSNQGAAFTRQLQNMLQLARVITLGAYNRNESRGAHYKPEFPDR
NDEEFMKTTMANFTGRTSAPAFHYEDIDVSLIQPRKRDYSKNKGE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgggtaaaggtaaaataatcgttgttggtggcggcctggcaggtctcatggctaccatc
aaagcagcagaggcagggcagcaggttgaattgttctcattggttcctgtaaaacgttct
cactctgtttgtgctcagggtggaataaatggtgcagttaatacaaaaggtgaaggagat
tctccatacattcacttcgatgatacagtttatggcggcgacttcctagcaaaccagcct
ccagtaaaagctatgtgtgaagcagcgccatccatcatacacatgtttgaccgtatgggt
gttatgtttaaccgtactccggaaggccttcttgatttccggcgttttggcggaacccag
catcaccgtactgcatttgctggagccactacaggacagcagctattgtatgcattggac
gagcaggtacgccgctatgaggtagatggattggttaccaagtttgaaggttgggaattc
cttggtgcggtagttgacgaagagcaaatctgccgtggtgtggtggcccaaaaccttcag
tcaatggagatcaaatcttttgccggagatgctgtcatcatggcttcaggcggtcctggc
attattttcggaaaatctactaactccattattaataccggttctgctgcttccattgtt
tatcagcagggagccacttatgcaaatggagaatttatccagattcaccctacagcattg
ccgggcgatgataagcttcgtttgatgagtgaatcagcccgcggtgaaggcggccgtgta
tggacatataaggacggaaagccttggtacttcctggaagagaaatatccggcgtatgga
aatcttgtgccgcgtgatatcgctacgcgtgaaatatttgatgtttgtgtcagtcaaaag
cttggcattaatggagaaaacatggtttatctggacctttcccacaaggatccaaaggag
cttgatatcaagctgggcggtatcattgaaatctatgagaaattcatgggcgaagaccct
cgcaaggtccctatgaaaattttcccggccgttcactattccatgggcggtttatgggtt
gactatgatcagatgacaaacatcaaaggcctttttgctgcaggtgaatgtgattattca
cagcacggtgcaaaccgcctgggcgctaactctcttctgtctgccatctatggcggaatg
gtagccggaccaaatgctgtgaaatatatcaacggtttggaaaagagttctgattccgtt
tcttcttcagtatttgacaatgctgttaaagagcaagaagaaaagtggaaccatattatg
tcactgaacggtacagaaaatgcgtacatccttcataaagaactaggtgaatggatgaca
gataacgtaacggttgtacgttacaatgataaacttcttcagactgaccaaaagatccag
gagcttctggaacgctatgaaaatatcaatatcaacgatacagccagatggagcaaccag
ggtgctgcctttacgagacagcttcaaaatatgcttcagcttgctcgtgttatcacactt
ggtgcatataaccgtaatgaaagccgcggtgctcattataagcctgaattccctgatcgc
aatgatgaagaattcatgaagacgacaatggctaatttcacaggcagaacttcggcaccg
gctttccactatgaagatatcgatgtttcgctgatccagccgcgtaaacgcgattattca
aagaacaagggggagtaa
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