KEGG   Peribacillus sedimenti: V1500_22255
Entry
V1500_22255       CDS       T11238                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
pesi  Peribacillus sedimenti
Pathway
pesi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pesi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    V1500_22255 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pesi03400]
    V1500_22255 (uvrB)
DNA repair and recombination proteins [BR:pesi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     V1500_22255 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      V1500_22255 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA P-loop_SecA TrwB_AAD_bind DUF87 AAA_30 HEM4 AAA_22 AAA_7 AAA_19 UFL1 AAA_16 PMT2_N AAA_6 UB2H AAA_5 DUF1280 AAA_25
Other DBs
NCBI-ProteinID: XNY91890
LinkDB
Position
complement(4522343..4524322)
AA seq 659 aa
MKNTFELVSKYSPQGDQPAAIKELVAGINSGKKHQTLLGATGTGKTFTVSNLIKEVNKPT
LVIAHNKTLAGQLYSEFKDFFPNNAVEYFVSYYDYFQPEAYVPSTDTFIEKDSSINDEID
KLRHSATSSLFERKDVIIIASVSCIYGLGSPEEYREMVVSLRTGMELERNALLHRLVDIQ
YERNDIDFQRGTFRVRGDVVEIFPASRDEHCVRVEFFGDEIDRIREVDALTGEIIGERDH
IAIFPASHFVTREEKMRVAINNIEKELEERLTELRDNGKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRAPGSTPYTLLDYFPEDFLIVVDESHVTLPQIRGMFNGDQARKQV
LVDHGFRLPSALDNRPLRFEEFESKVHQAVFVSATPGPYELEHTPEMIEQIIRPTGLLDP
NIDVRPIEGQIDDLISEIQDRTSKDERVLVTTLTKKMSEDLTDYLKEIGIKVQYLHSEVK
TLERIEIIRELRMGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNANGHVIMYADRMTNSMELAISETKRRRAVQEKYNEQHGIIPQTIQKSIRDSIRATH
AAEEEAQYEAAPVRGKLTKKERDEMMARMEKEMKEAAKALNFERAAELRDLLLELKAEG
NT seq 1980 nt   +upstreamnt  +downstreamnt
gtgaagaatacgtttgaactagtatcaaaatactcgccgcagggtgaccagccggcagcg
atcaaagagctcgtcgctggcattaacagcgggaaaaaacatcaaacactgctcggtgca
actgggacgggaaagacgttcactgtttccaatttgatcaaggaagtgaataagcccacg
cttgttatcgcgcataacaagacacttgcagggcagttatacagcgaatttaaagatttc
ttcccaaacaatgccgttgagtatttcgtcagttattatgattacttccagccggaggca
tatgttccgtcaacagacacatttattgaaaaagactcaagcataaatgacgagatcgat
aaacttcgccattcagctacatcatcattattcgagcgtaaggatgtcatcattatcgcc
agtgtatcctgcatttacggtttgggttcgcctgaagaataccgggaaatggttgtatcc
ctccgaactggcatggagcttgagcgcaatgctttactgcatagattggtggatatccaa
tatgagagaaatgatattgatttccagcgcggtacattccgcgtacgcggtgatgtagtg
gaaatcttcccggcctcccgggatgagcactgtgtccgggtagaattcttcggggatgaa
attgaccggattcgcgaagtggatgcgctcaccggagagattatcggagaacgtgaccat
atagcgatcttccctgcttcccacttcgtaaccagggaagaaaagatgagggttgccata
aataatatcgagaaagagcttgaagaacgattaacggagctgcgtgataacgggaagctg
ctggaagcgcagcgattagaacagcgtacaagatatgaccttgagatgatgcgtgaaatg
ggcttttgttcaggcatcgagaactattcccgccatctgacgctgagggcacccggatcc
acgccatatactttgcttgattacttcccggaggatttccttatcgttgtcgatgagtcg
catgtcaccctgccgcaaatacgcggcatgttcaatggtgaccaggcgcgcaagcaggtg
ctggtagatcacggtttccgtcttccatctgcacttgataaccgcccattgcgctttgaa
gaatttgaatcgaaggtacatcaggccgtatttgtttctgcgacgccgggtccttacgaa
ttggagcatacccctgaaatgattgagcagatcatccggccaaccgggcttcttgatcct
aacattgatgtgcgtccaattgaaggccagatcgacgatctaatcagtgagatacaggac
agaacatcgaaagatgaacgtgttcttgttaccactcttacaaagaaaatgtccgaagac
cttaccgattatttaaaagaaatcggcatcaaggttcaataccttcattctgaggtaaag
acattagaaaggattgaaataatccgggaattgaggatgggcaaatacgacgtactggtc
gggatcaaccttttaagggaagggcttgatattcctgaggtttcactggttgcgattctt
gatgcggataaagagggcttcctccgttcagaacgctccctgatccagaccattgggcgt
gctgcacgtaatgccaatgggcatgtcattatgtatgctgaccgcatgaccaattccatg
gaactggcaatcagtgagacaaaacgacgccgtgctgtgcaagagaaatataatgaacag
catggcatcattccgcagacgatacaaaaaagtattcgcgactctatacgtgcgactcac
gcggctgaggaagaggcgcaatacgaggcagcaccagtccgtggcaagttaaccaagaag
gaacgcgacgaaatgatggcacggatggaaaaagaaatgaaggaagcagcgaaggcactg
aacttcgaacgtgccgcagaactaagggatttgcttcttgagctaaaagcggaagggtga

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