Peribacillus sedimenti: V1500_23805
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Entry
V1500_23805 CDS
T11238
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi00260
Glycine, serine and threonine metabolism
pesi00460
Cyanoamino acid metabolism
pesi00630
Glyoxylate and dicarboxylate metabolism
pesi00670
One carbon pool by folate
pesi00680
Methane metabolism
pesi01100
Metabolic pathways
pesi01110
Biosynthesis of secondary metabolites
pesi01120
Microbial metabolism in diverse environments
pesi01200
Carbon metabolism
pesi01230
Biosynthesis of amino acids
pesi01240
Biosynthesis of cofactors
pesi04981
Folate transport and metabolism
Module
pesi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V1500_23805 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V1500_23805 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V1500_23805 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V1500_23805 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V1500_23805 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V1500_23805 (glyA)
Enzymes [BR:
pesi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V1500_23805 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
OKR_DC_1
SelA
Motif
Other DBs
NCBI-ProteinID:
XNY92180
LinkDB
All DBs
Position
complement(4877179..4878420)
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AA seq
413 aa
AA seq
DB search
MNRLATQDEQVFKAIQDELGRQRSKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRY
YGGCEYVDVVEDLARDRAKQIFGADHANVQPHSGAQANMAVYFTVLEPGDTVLGMNLSHG
GHLTHGSAVNFSGVQYNFVEYGVDQENHLIDYEDVLAKAKQHKPKLIVAGASAYPREIDF
KRFRAIADEAGAYLMVDMAHIAGLVATGHHPSPVPYADFVTTTTHKTLRGPRGGMILCKE
EFAKKIDKSIFPGIQGGPLMHVIAAKAVAFGEALREEFKSYSQQIIDNAHRLGEALKKEG
LDLVSGGTDNHLLLLDLRSINLTGKIAEKALDDIGITVNKNTIPFDPESPFVTSGIRIGT
AAVTTRGFGLEDMDEIASIIGLVLKNHEDQTKLKEAEERVAALSAKYQLYPSF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtttagccacacaagatgaacaagtttttaaagccattcaggatgaactaggc
cgtcaaagaagcaagattgaattaattgcttcagaaaactttgtaagtgaagctgttatg
gaggctcaagggtcggtcttaaccaataagtatgcggaaggttatccaggcaaacgatac
tatggaggctgtgaatatgtagacgtagtcgaggatttggctcgcgaccgtgcgaagcaa
atttttggtgcagatcacgccaacgtacagccgcattctggagcccaggccaatatggct
gtgtattttacggttctggaacctggtgatacggtcctcgggatgaatctctcacacggg
ggacatttaacacatggaagcgccgttaacttcagcggtgtgcagtataactttgtagaa
tacggtgtcgatcaggaaaatcatctcatagactatgaggatgttcttgccaaggcaaag
cagcataaacctaaattgattgtagcgggtgccagtgcttatcctcgtgaaatagatttt
aagcggttcagagcaattgctgatgaagcaggcgcctatttgatggttgatatggctcat
atcgcgggacttgttgcgacagggcatcaccctagcccagtgccttatgcagattttgtt
actacaacaacccataagactcttcgcggacctcgcggaggaatgattctttgcaaagaa
gaatttgcgaagaaaatagataaatccatattcccgggaatccagggcggcccgttaatg
cacgtcattgccgcaaaggctgtcgcattcggagaggctttgcgagaagagtttaaaagc
tactcacagcagataatcgataatgctcaccgccttggtgaagctttgaaaaaagagggt
ctggatttggtatctggaggtacggataaccatcttctgctattggacctccgttcgatc
aacttgaccggaaagattgctgaaaaagctttggatgatatcggtattacggttaacaaa
aacacgattccatttgatccggaaagcccatttgtaacaagcgggatccgaattgggact
gccgctgtgactacccgcggctttggcctggaagacatggacgaaattgcgtccataatt
ggactggtgttaaaaaatcacgaagatcagaccaaacttaaggaagctgaagaaagagtt
gctgccctttctgcaaagtatcagctttacccgtcattttaa
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