Peribacillus sedimenti: V1500_23910
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Entry
V1500_23910 CDS
T11238
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pesi Peribacillus sedimenti
Pathway
pesi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
V1500_23910 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pesi03021
]
V1500_23910 (rpoE)
03400 DNA repair and recombination proteins [BR:
pesi03400
]
V1500_23910 (rpoE)
Transcription machinery [BR:
pesi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V1500_23910 (rpoE)
DNA repair and recombination proteins [BR:
pesi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V1500_23910 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARE-HTH
WHD_RNase_II
BUD22
ColG_sub
Mrr_N
Motif
Other DBs
NCBI-ProteinID:
XNY92197
LinkDB
All DBs
Position
complement(4901342..4901944)
Genome browser
AA seq
200 aa
AA seq
DB search
MRALGLNQYSTEQIMEMSLLELAFEIMAEKKQPVSFKELVDELKKLQNLTDEDLQNRLAQ
FYTDLNVDGRFTSLGENRWGLKTWYPVDQIEEEVVHTAKPKKKKARKAVDDEDLDDEDLD
FEEEDDLLDDLDEEEDDLLDDLDEDDLADDDLLEDSDDDEELDEDLIDDEDEDEEFGLED
DEDEEEEEEELEDYDDDKKE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggctttgggtttaaatcaatattctacagagcaaatcatggaaatgtcattattg
gaacttgcgtttgaaataatggcagaaaaaaaacagccggtgtcatttaaagagcttgtg
gatgagcttaagaaattgcaaaaccttactgacgaggatttgcaaaacaggctggcccag
ttctataccgatttaaatgtggatggacggttcacttcactgggagaaaaccgttggggc
ttaaagacctggtatccggtcgatcagattgaagaagaagttgtacatacagccaagcct
aagaagaagaaggcaaggaaggccgtggatgacgaggatcttgatgatgaggatcttgac
tttgaagaggaagatgatctccttgatgatcttgatgaagaggaagatgatctccttgat
gaccttgatgaagatgatttagcggatgatgacttattagaagatagcgacgatgatgaa
gagctggatgaagaccttatagatgatgaggatgaggatgaggagttcggacttgaagac
gatgaggatgaagaagaggaagaggaagagcttgaagattacgatgatgacaaaaaggaa
taa
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