Peribacillus sedimenti: V1500_24250
Help
Entry
V1500_24250 CDS
T11238
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pesi Peribacillus sedimenti
Pathway
pesi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pesi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V1500_24250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pesi03019
]
V1500_24250
03009 Ribosome biogenesis [BR:
pesi03009
]
V1500_24250
Enzymes [BR:
pesi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
V1500_24250
Messenger RNA biogenesis [BR:
pesi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V1500_24250
Ribosome biogenesis [BR:
pesi03009
]
Prokaryotic type
rRNA helicases
V1500_24250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
Exo_endo_phos_PGAP2IP
Ig_SibA
NYAP_N
Motif
Other DBs
NCBI-ProteinID:
XNY92255
LinkDB
All DBs
Position
complement(4976629..4977951)
Genome browser
AA seq
440 aa
AA seq
DB search
MNFTQLGISTKRNKILIESGISQPTSIQEKAIPSILEGKDIIGRAQTGTGKTLAFLLPIL
EKVKPATSHIQSLIVSPTRELAIQITAELQKLTAMDDNIHILAVYGGQDVDQQIRKLKQN
ISIVVSTPGRLLDHARRGTIDLSNISQLVLDEADQMLHIGFLPEVEEIIGLTPASRQTML
FSATMPEQVQSLANRFMKKPQIISVKGEQITVEKIRQLVIETTDRGKQAALFQTIQDEQP
FMAIIFCRTIRRVSKLQDALRSAGFNSAELHGDLSQSKREQVMKKFREAAFQLLVATDVA
ARGLDVEGVTHVFNYDVPEDAESYIHRIGRTGRAGEEGLAVTFVASKDLRKLTEIEKGIR
LTLERRKITGMEENEGRSRDRRDSEKKPGRNNNTRGSKGKSAANKGKFQGDKEQGRKQSP
NTSRDRGQKQANRSGSPRSR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaactttacccagttaggaatctcaactaaacgaaataaaattctgatcgaatccggt
atatcgcagcctacttccattcaggaaaaagccattccttctattcttgaaggaaaagat
ataattggcagggcccaaacaggaaccggcaagacacttgccttcctattaccgattttg
gaaaaagtaaagccggccacttctcatatccagtccctcattgtctctccaacacgggag
ctggctattcaaattaccgcggagcttcaaaaactgactgcaatggatgacaacattcat
atactggcagtatatggggggcaggatgttgatcagcagattagaaagttaaagcaaaat
atttcaattgttgtgtccacaccaggaaggctccttgatcatgccagaagagggaccatc
gatttgtcaaatatttcacagcttgttttggatgaggcagatcaaatgcttcatatcggt
tttctaccagaggtagaagaaataattggcttgactccagcttccaggcagacaatgcta
ttctcagcaacgatgcctgagcaagtacaatcattggcaaatcgattcatgaagaaacct
cagataatctcggtaaaaggtgagcaaataacggtggagaaaatacgccagctcgttata
gagacaactgatagagggaagcaggcagctctgtttcaaaccatccaggatgaacagcca
tttatggcaattattttttgtagaacaataaggcgggtaagcaagcttcaagatgcatta
cggagtgcgggttttaattctgcagaactgcatggtgatttatcccaatccaaaagagaa
caggtaatgaaaaaatttagagaagctgctttccagcttttggttgcgacagatgttgcg
gccagaggactagatgtggaaggagtgactcatgtatttaattatgacgttccggaggat
gccgagagttatatccaccggattggacgaacaggccgggctggtgaagagggacttgct
gttactttcgttgcatcaaaggaccttcgaaaattaactgagattgaaaaaggaatccgg
cttacattggagcgcagaaagattactggaatggaggaaaatgagggccgctctcgagat
agaagggatagtgagaaaaagcccgggcgtaataataacacccgaggctcaaaaggtaaa
tcagcggctaataaagggaaatttcaaggcgataaagaacagggacgaaaacagagccca
aacacaagccgcgaccggggacagaaacaagcaaaccgttctggcagtccccgttcaaga
taa
DBGET
integrated database retrieval system
