Paraperibacillus esterisolvens: V1501_07320
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Entry
V1501_07320 CDS
T11219
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pest Paraperibacillus esterisolvens
Brite
KEGG Orthology (KO) [BR:
pest00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pest03032
]
V1501_07320 (topA)
03400 DNA repair and recombination proteins [BR:
pest03400
]
V1501_07320 (topA)
Enzymes [BR:
pest01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
V1501_07320 (topA)
DNA replication proteins [BR:
pest03032
]
Prokaryotic type
DNA Topoisomerases
V1501_07320 (topA)
DNA repair and recombination proteins [BR:
pest03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V1501_07320 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
XNY73802
LinkDB
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Position
1437742..1439817
Genome browser
AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIEKYLGKKYKVKASMGHVRDLPRSQMGVDVENEFNPKYITIRGK
GPVLKDLKTAAKKAKKIYLAADPDREGEAIAWHLAHTLDVDTSSDCRVVFNEITKDAIKE
SFKHPRPIDMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREK
EIQKFIPEEYWTIKAEFMKGKDLFEASFFSLDGKKVQLTNEEEVNSVLSRLKGHEFQVSN
VTKKERKRNAAAPFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIEIGKEGTAGLITYMR
TDSTRISDTAKNEAREFISGQYGAEYAVAEERKDKKQTNAQDAHEAIRPTSALRDPASVK
EYLSRDQYRLYKLVWERFVASQMAPAILDTMSVDLENSGVLFRATGSKIKFAGFMKVYVE
GTDDSEEEKENFLPVLEEGDRAKAGDMDKKQHFTQPPPRYTEARLVRTLEELGIGRPSTF
APTLDTIQKRGYVALDNKRFIPTELGEIVLELILEFFPDILDVEFTAKMERDLDDIEDGK
IAWVRVIDDFYKDFEGHLEKAEAEMEKVEIKDEPAGEDCEHCGSPMVFKMGRYGKFMACS
NFPDCRNTKAIVKEIGVKCPNCHEGNIIERKSKKKRIFYGCDRYPECEFISWDKPLARKC
PKCDNFLVEKKLKKGIQVQCVNCDYKEEPQS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattacctggtaatagtggaatcgccggcaaaggcgaagacgattgaaaaatat
ttagggaaaaaatataaggtcaaagcttccatggggcatgtaagagatttgcccaggagc
caaatgggagtagacgttgaaaacgaattcaatcctaagtatataaccattagaggaaaa
ggccctgtattaaaagatctgaaaacagccgcaaaaaaggcaaagaaaatttatcttgcg
gctgacccggacagggaaggggaagcaattgcctggcatctggcgcatactctggatgtc
gatacctcatccgactgcagagtggttttcaatgaaatcacaaaagacgccattaaagaa
tcattcaagcatccaaggccgatcgatatggatctcgtggatgcccagcaggcaaggcgg
atccttgaccggctcgtaggctataacatcagcccgctcctgtggaaaaaagtcaagaaa
ggcctgagcgcagggcgggtacaatcggtagcggtccgcctgatcatcgaccgtgaaaaa
gagatacaaaagttcattccagaagaatattggacaatcaaagcggaattcatgaaaggc
aaggacctgttcgaagcatctttcttcagcctggatggaaaaaaagtacagctgacgaat
gaagaagaagtcaattcggtattatccagattgaagggccatgagttccaggtttccaat
gtcactaagaaagagcgcaaaagaaatgctgctgccccttttacgacatcttcgcttcag
caggaggcagccaggaagcttaatttccgggcgaaaaagacaatgatgatcgcccagcag
ctatacgaagggatcgagatcggcaaagaagggacagccggactcatcacttatatgaga
acagattcaacaaggatttccgatacagcgaaaaatgaagccagggaatttatttccgga
caatatggcgccgaatatgccgttgccgaagaaagaaaggacaaaaagcagaccaatgca
caggatgcacatgaggcaatccggccaacaagtgccttaagggatcctgcttccgttaaa
gaatatctttccagggatcaatacagattgtataagctggtctgggagcgcttcgtcgca
agccagatggcccctgccattctggatacaatgagcgtggaccttgaaaactcgggtgtg
ctgttcagggcgacaggctcaaagatcaagttcgccgggtttatgaaggtgtatgttgaa
ggaacggacgattcagaagaagaaaaggaaaacttcctgcctgtacttgaagaaggcgac
cgtgcaaaagcgggggatatggataagaagcagcattttacccagccgccgccgcgctat
acagaagcacggctcgtaaggacactggaagagctcggaatagggcggccttccaccttt
gcaccgactcttgataccatccaaaagcggggctatgtcgcgctggataacaaaaggttc
atcccaaccgagcttggtgaaattgtactggagctcatccttgaattcttccctgatatt
cttgatgttgaattcacagcaaagatggagagggaccttgatgacattgaggacggaaag
attgcctgggttcgtgtcattgatgatttttataaagactttgaaggacatcttgaaaaa
gcggaagcagagatggagaaggtagaaataaaagatgaacccgcaggcgaagattgtgaa
cattgcggaagtcccatggttttcaaaatggggcgttacggcaagtttatggcctgctct
aatttccctgactgccgcaataccaaagccattgtcaaggaaatcggcgttaagtgcccg
aattgtcatgaaggaaatatcatcgaaagaaagagcaagaagaaacggattttctacggc
tgcgatcgatatcctgaatgtgagtttatttcctgggataagccgcttgcccgaaaatgt
ccgaaatgcgacaatttcctggtggaaaaaaagcttaaaaagggcattcaggtacagtgc
gtgaactgcgattacaaagaagagccgcaaagctag
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