Paraperibacillus esterisolvens: V1501_07760
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Entry
V1501_07760 CDS
T11219
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pest Paraperibacillus esterisolvens
Pathway
pest03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pest00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V1501_07760 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pest03019
]
V1501_07760 (rny)
Messenger RNA biogenesis [BR:
pest03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V1501_07760 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
XNY73882
LinkDB
All DBs
Position
1528852..1530411
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AA seq
519 aa
AA seq
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MEPITIISILLGLFVGAVVGYFVRKSVTENKIAGAKVSAEQIIEDARREADSKKKEALLE
AKDEIHKLRSDAEKDVRERRTELQKQENRLLQREENLDRKDETLNKRDLLLEKKDDSLNQ
RQQHIEEMESKVDEMVRTQQTELERISGLTREEARGIILDKVEKELAHDTALIIKESENR
AKEEADKKAREVLSLAIQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARIALDNLVQDGRIHPARIEEMVDKARREVDEHIRE
IGEQTTFEVGVHGLHPDLIKIMGRLKFRTSYGQNVLKHSMEVAFLSGLLAAELGEDESLA
RRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDAEPTSIIAVLVA
AADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRIMVRPEAIDD
LEAHRLARDIRKRIEEELDYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaacccattacaatcatctccattttgcttggcctattcgtcggtgcagttgttggt
tattttgtccgcaaatccgttacggagaacaaaatagccggggcaaaagtttctgcagaa
cagattatcgaagatgcaagacgtgaagctgattctaaaaagaaagaagccctgttggaa
gctaaggatgagattcataaacttcgttcagatgcggaaaaagatgtccgtgaacggaga
actgaattacaaaaacaagaaaaccgtttattacagagagaagagaatcttgaccgcaag
gatgagacgcttaacaagcgcgatcttcttctagaaaagaaagacgattctctaaaccaa
agacaacagcatattgaagagatggaaagcaaagtggacgagatggttcgtactcagcaa
accgaattggaacgtatctccggacttacccgcgaggaagcgagaggcattattcttgat
aaggtagaaaaagaattggcccacgatacagcacttatcataaaagaaagtgaaaaccgc
gcgaaggaagaagccgataagaaagcaagggaagtactttctcttgcaatccaaagatgc
gcagcagaccacgtggcggaaacaaccgtctccgtcgtcaatctccctaatgatgaaatg
aagggacgcatcattggccgtgaaggacgtaacattcgtacccttgagacgctgacagga
atcgatttgattatcgatgatactcctgaagccgtcatcctttcagggtttgatccaatc
aggcgtgaaacagcgagaattgctttagacaatcttgtccaggacggaaggatccatcct
gcgcgtattgaagagatggtggataaagccaggcgtgaagtggatgaacatatccgtgaa
atcggtgaacagactacctttgaagtgggagttcacgggcttcatccagatcttatcaaa
attatgggccgcttgaaattccgtacaagttacgggcagaatgtacttaagcattccatg
gaagtcgccttcctgtcagggcttcttgcagctgagcttggggaggatgaatcccttgca
cgccgtgcaggactgctgcatgatatcgggaaagccatcgaccatgaagtggaaggaagc
cacgtggaaattggcgtggaacttgccactaaatataaggagcatcctgttgttattaac
agtattgcttcccaccatggcgatgctgagccaacttccatcatagctgtcctggttgct
gcagcagatgcattatccgctgcaaggccgggcgcaagaagtgaaacactggaaaattat
atccgcaggcttgaaaagctggaagagatctcagaatcctacgagggtgtagagaaatcg
ttcgcgatacaggctggccgcgaagtgcgcatcatggttcgtccagaagcaattgatgat
cttgaagcacatcgcctggcaagggatatccggaaacgtattgaagaagagctcgattat
cccggccatatcaaagtgactgtgatcagggaaaccagagccgttgagtatgcaaaataa
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