Paraperibacillus esterisolvens: V1501_15320
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Entry
V1501_15320 CDS
T11219
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pest Paraperibacillus esterisolvens
Pathway
pest03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V1501_15320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pest03400
]
V1501_15320
Enzymes [BR:
pest01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V1501_15320
DNA repair and recombination proteins [BR:
pest03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V1501_15320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
nSTAND3
HHH_5
UvrD_C
T2SSE
AAA_16
AAA_28
NPHP3_N
AAA
AAA_18
AAA_12
DUF2905
AAA_17
ABC_tran
TsaE
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
XNY71406
LinkDB
All DBs
Position
complement(3020447..3022861)
Genome browser
AA seq
804 aa
AA seq
DB search
MLQQDSLNLFADGDKLFMKGRHLVTIFHNEQNLYSVVRIRLDETNLEYDEKEAVVTGYFP
RIHEHETYIFFGQMKDHPKFGQQFHVEHFRKDMPHTRDGIINYLSSELFKGIGKKTAESI
VDTLGENAISRILESPSLLDTIPKLNPDKAKDLYDNLMEHQGLEKVIISLNQLGFGPQLS
MRIYQVYKHETLSVIQKNPYQLVEDIEGVGFGRADELGFQVGIAGNHEDRIKAACLYTLE
NDCLQEGHVFLETEHLLRRVKALLEENKRDVIEYTNISAEIIKLGEEGKVIVEDERIYTP
SLYFSEGGLAGKIEKILEQEEYEDQFPESEFLLALGKLEERIEVEYAPAQKDAIQTALMS
PMLILTGGPGTGKTTVIKGIVELYSELHGASLDPGDYKKEEPFPFVLAAPTGRAAKRMTE
STGLPAVTIHRLLGWNGTGEFTHNENNPIGGKILIIDEMSMVDTWLAYQLFKALPEHIQV
ILVGDEDQLPSVGPGQVLKDLLRSGMVPTVQLQHIYRQDDGSSIISLAHEIKQGRLPGDI
RSQQPDRSFFPCNAAQIAEVVEKVVKNAKKKGYSARDIQVLAPMYRGPAGIDRLNVLIQG
ILNPNEDGKKRELSFGDVTYRVGDKVLQLVNQPESSVYNGDIGQIVAILYAKENTEKQDM
VIVSFDGLEITYTKSDLSQITLAYCCSIHKAQGSEFPIVIMPVVKSYYRMLRRNLIYTGI
TRSRKFLILCGEEEALRLGVERNNELGRKTTLCERLEKTMAEKEVPAVIADESQNIIASM
MSADPMIGMGELTPYDFMSVEKIQ
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcagcaggattcattaaatctatttgcagatggtgacaaattgttcatgaaggga
cggcatctggtcaccatctttcataacgagcagaatctttattcagtagtccggatccgc
ctggacgaaaccaatctggaatatgatgaaaaagaagcggtcgtcaccggatactttccc
cgaatccacgagcatgagacttatatcttttttggccagatgaaggaccatccaaagttc
gggcagcaatttcatgtggagcatttcaggaaggatatgccccatacacgcgatgggatc
atcaattacttatccagtgagctttttaaaggaatcggcaaaaaaaccgcagagagcatt
gttgacacattaggtgaaaatgccatctcccgcatcctggaaagtccttcactactggat
acaattcctaagctgaacccggataaagccaaggacctatatgacaatctcatggagcat
caggggctggagaaggtgatcatcagcctcaatcagctcggcttcgggccgcagctgtcc
atgcgcatataccaggtctataaacatgaaacgctgtcggtgatacaaaagaatccatac
cagcttgtcgaggatatagagggtgtcggcttcgggcgcgcagatgagctgggctttcag
gttgggatcgccggcaatcatgaagaccggatcaaggcagcctgtctgtatactcttgaa
aatgactgccttcaggaaggccatgtttttcttgaaacggagcatcttctccggcgcgtc
aaagccctgcttgaggaaaataagcgggatgtaattgaatataccaatatatccgctgaa
atcattaagcttggtgaagaaggcaaggtcattgtggaggatgagcggatatatacacct
tccctatacttttcagagggaggcctcgccggcaagattgagaaaatactggaacaggaa
gagtatgaagatcaatttcctgaatctgaattcctgctggcgctgggcaagcttgaagag
cggattgaagtggagtatgcccctgcccaaaaagatgccattcagactgcattgatgtcc
cctatgctgattctcaccggcggtccggggacaggaaaaactacagtaattaaaggcatc
gtggaattgtactcagagctgcacggagcatcacttgatccgggggattataaaaaggaa
gagcccttcccgtttgtccttgctgcgcctaccgggcgtgcggccaaaaggatgaccgaa
tcaaccggactgcctgccgttaccatccaccgccttctcggctggaacggaacaggagag
ttcactcataatgaaaacaatccaatcggcggaaagattctgatcattgatgagatgtcc
atggtagatacctggctcgcgtatcagctgttcaaggcgctgcctgaacatattcaggtt
attctcgtgggggatgaggatcagctgccatcggtcggaccgggtcaggttttgaaggat
ctgctgcgctcgggcatggtaccgactgtgcagcttcagcatatataccgacaggacgat
gggtcttccatcatcagcctcgctcatgaaattaagcagggaaggctgcctggcgatatc
cgcagccagcagccggaccgctccttctttccgtgcaatgccgcccagattgcagaagtg
gttgaaaaggtggttaaaaacgccaagaaaaagggctattcagcccgcgatatccaggtg
cttgcccctatgtaccggggacctgcgggaattgacaggctgaatgtcctgattcaaggg
atattgaacccgaatgaagacggcaaaaagcgggagctctcgttcggtgatgttacctac
agggtcggggacaaggtgctgcagcttgtaaaccagccggaaagcagtgtctacaacggg
gacatcggccagattgtggccatcctatatgcaaaggagaacacagaaaagcaggatatg
gttattgtatcctttgatggtctagagattacgtataccaaatccgatctctcgcagatt
acccttgcctactgctgttccattcacaaggcacagggaagcgagttcccgatcgtcatc
atgcctgtggttaagagctattacaggatgctgaggaggaatttgatttatacaggaatc
acaaggagcagaaaatttctcatactctgcggggaggaagaagccctgcggcttggtgta
gagagaaataatgaactggggcggaaaacgactctctgtgaacgactggaaaaaacgatg
gccgaaaaagaggttcccgccgttattgcagatgaaagccagaatataattgcatcaatg
atgtctgccgacccgatgataggcatgggtgagctgactccttatgatttcatgagcgtc
gaaaaaatacaataa
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