Paraperibacillus esterisolvens: V1501_15440
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Entry
V1501_15440 CDS
T11219
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pest Paraperibacillus esterisolvens
Pathway
pest03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V1501_15440 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pest03400
]
V1501_15440 (ruvB)
Enzymes [BR:
pest01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1501_15440 (ruvB)
DNA repair and recombination proteins [BR:
pest03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V1501_15440 (ruvB)
RecFOR pathway proteins
V1501_15440 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_14
nSTAND3
AAA_22
NB-ARC
TIP49
AAA_3
RNA_helicase
DUF815
AAA_18
AAA_25
Rad17
AAA_24
NTPase_1
TsaE
AAA_17
AAA_33
AAA_28
Sigma54_activ_2
NPHP3_N
NACHT
IstB_IS21
ABC_tran
Bac_DnaA
Parvo_NS1
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
XNY71429
LinkDB
All DBs
Position
complement(3049349..3050350)
Genome browser
AA seq
333 aa
AA seq
DB search
MDDRIVNQEADSAELSYELSLRPQNLRQYIGQDKVKSNLEVFIEAARMRSETLDHVLLYG
PPGLGKTTLAAIIANEMGVNLRTAAGPAIERPGDLAAILSALQPGDVLFIDEIHRLPRAV
EEVLYPAMEDFCLDIVIGKGPAARSVRLDLPPFTLVGATTRAGSLSAPLRDRFGVLSRLE
YYTVEQLKQIVVRTADILETEIDGEAADEIARRSRGTPRIANRLLRRVRDFAQVRGNGLV
TLSMAGQALELMQVDRLGLDHIDHKLLKGIIERFRGGPVGLDTISATIGEESHTIEDVYE
PYLLQIGFIQRTPRGRIATPLVYEHFNIEMPTA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagaatagtaaaccaggaagcagactctgccgaattatcatatgagttaagt
ctgcgtccgcagaatttaaggcagtacatcgggcaggacaaggtgaaatccaatcttgag
gtcttcatagaagctgcgagaatgcggtctgagacgcttgatcatgtcctgctgtacggt
ccgccgggtcttggtaaaacaacccttgcggccattatcgcaaatgaaatgggtgtgaat
ctccggacggctgccggtcctgctatcgagaggccgggagatcttgcggccattctcagc
gccctgcagccgggtgatgtgctctttatagacgagatacaccggctgcctagagctgtt
gaggaagtgctgtatccggcgatggaggatttctgcctggacatagtcatcgggaagggc
ccggcagcgcggtcggtaaggcttgatctgcctcccttcacactggtgggggcgacaacc
agggccggttctttatccgccccgctcagggaccgcttcggggtcctgagcaggcttgaa
tattacacagtggaacagctgaagcaaattgtcgtacggacggctgacatcctagagact
gaaatcgatggggaagcggcagatgaaatagcaaggagatcaagggggaccccgaggata
gccaaccgcctcttaaggagggtccgtgacttcgcacaggtaagggggaatgggcttgtc
acgttgtcaatggccggccaggccctggaattgatgcaggtggaccgtttaggactggat
catattgaccataaattacttaaagggatcatcgagcgcttcaggggcggtccagtgggg
ctggataccatttcggccaccatcggggaggaatcccataccatcgaggatgtatacgaa
ccttacctgctgcagatcgggtttatccagagaacacctcgcggaaggattgccactccg
ctagtgtacgagcatttcaatattgagatgccgaccgcatag
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