Paraperibacillus esterisolvens: V1501_17990
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Entry
V1501_17990 CDS
T11219
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pest Paraperibacillus esterisolvens
Pathway
pest03420
Nucleotide excision repair
pest03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1501_17990 (helD)
03430 Mismatch repair
V1501_17990 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pest03400
]
V1501_17990 (helD)
Enzymes [BR:
pest01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1501_17990 (helD)
DNA repair and recombination proteins [BR:
pest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1501_17990 (helD)
MMR (mismatch excision repair)
Other MMR factors
V1501_17990 (helD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNY71868
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Position
complement(3553253..3555571)
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AA seq
772 aa
AA seq
DB search
MNNTHSQWKQEQDRVDYVRKQIEVKEENLRQHSGTIKQGIRALRENFWEDVTVNLDEPDD
VIETQASIKQQAELLSERERSHGLLHEGMKKLEALKKSPYFGRIDFHEDGEADGESLYIG
IASLLDESEENFLIYDWRAPVSSLYYDFPPGPAQYQTMDGAITGRIELKRQYVIKNGKIK
GLFDTGITIGDRLLQELLGSRSDTNMKSIVATIQKEQNQIIRNEKNKVLVVQGVAGSGKT
SAALQRVAYLLYTHRETLHSQNMVLFSPNPLFNSYISTVLPELGEENMRQTTFKQFAETL
LGSAFELEDPFDQMEASMNGENRWRLAAISYKSSLDFKDLINDYLGSLGKGGVVFRDILL
KNEILIPSEKISDYFYSLDQHIPMPNRMRQTAEWLLGQVMESERAEQEKDWVLEEVQLLD
KEDFLEAHRRIQKEKRSFGDHFDESAREEELLRRKVIRGYFLPIIKRVKRLGFANVPETF
LGMFEGDAPEVLKGRSGEWEGICSLTLSAIKKRKLLWEDAAPYLHFRDHIIGRRSFSQIR
HVFIDEYQDYSPFQSDYLKGLFRSSGMTLLGDLNQSIFPGSRSRSLLEENAAEETERIEL
LRSYRSTREIVEFTRELVENGDRIIPFTREGGLPEVFGLSSGVDMYEFIAGMIEKELEQG
SETAALICKTEKDARDAYAMLKDRMDIQLMDRHASSYLKGAVILPVYLAKGIEFDSVFIH
DASSSAFHKASERNLFYTACTRAMHKLYVFFVNEPSPFISRMPTSKYIFKKI
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgaataacacccattcacagtggaagcaggagcaggaccgggttgattatgtacggaaa
cagattgaggtaaaggaggagaatttaaggcagcactccgggacaataaagcagggcatc
cgggcgcttagagaaaatttttgggaggatgtgactgtcaatctggatgagcctgatgat
gtcattgaaactcaggcgagcatcaaacagcaggctgagctgctttcagagcgggaaaga
agccatgggcttcttcatgaaggaatgaagaaactggaagccttgaagaaatccccatac
tttgggcgtatcgactttcatgaagatggggaagcagacggggagtcactatacattggg
attgcctcccttcttgatgaaagtgaagaaaatttccttatctatgattggcgtgctccg
gtttcaagtctttattatgattttcctcccggaccggcacaatatcagacaatggacggg
gccattaccggccggattgagctcaagaggcagtatgttatcaagaatggaaagatcaaa
ggcttatttgataccgggataaccattggtgaccggctgcttcaggaattgttaggcagc
cgttcggatacaaatatgaagagcattgtcgccaccatacaaaaggaacaaaatcagatt
atacggaatgaaaagaacaaagtcctggttgtgcagggagtggcagggagcgggaagacc
tcggctgccctccagagggtcgcatacctactatatacacatagagaaacactccattca
cagaatatggttctcttttctcccaatccgctatttaacagctatatatctacagtcctg
ccggagcttggggaggaaaatatgcgtcagacgacgtttaagcagtttgcggaaactctg
cttggctctgcatttgaactggaggatccttttgatcagatggaagcttccatgaacgga
gagaaccggtggcggcttgcggccatttcctataagtcatccctggatttcaaggatttg
atcaacgattacttaggttcgcttggaaaagggggagtggtgttcagggatatactcctc
aagaatgaaatactaattccttcagaaaagatttcggattatttttacagcctggaccag
catatcccgatgcctaacaggatgcgccagacagccgagtggcttctcgggcaggtaatg
gaaagtgagagggcagagcaggagaaagactgggtgctcgaagaggttcagctccttgat
aaagaggacttcctggaagcacaccgaaggatacaaaaagaaaaaagaagttttggcgac
cattttgatgagagcgcgcgcgaggaagaactgcttcgccggaaagtgatccggggctat
ttcctgcccatcataaaaagggtgaaaaggctgggctttgcaaatgtaccggaaactttc
cttggcatgtttgaaggcgatgcccccgaagttctaaaaggcaggtctggagaatgggag
ggaatttgttcactcactctatctgccataaagaaaaggaagctgctatgggaggatgct
gcgccatacctgcattttagggaccatattattggacgaagatccttcagccaaatccgg
catgtatttatagatgaatatcaggattattcacctttccagtcagattatttgaaagga
ctcttcagatcttcggggatgacactgctcggtgatttaaaccagagcatttttccagga
tcaagatcccgttccctcttggaggaaaacgctgcagaggaaacggagaggattgaactt
ctgcgaagctacaggtccaccagggagatcgttgaatttacgagggaacttgtggagaat
ggggacagaatcattcccttcacccgggaaggcggactgcctgaagtattcggactgtct
tcaggggtggatatgtatgagttcatagcaggcatgattgagaaggagcttgaacaagga
tcagaaacggcggcattgatctgcaagactgaaaaggacgcccgggacgcctatgccatg
ctgaaagacagaatggacatccagctgatggaccgtcatgcgtcttcctatctgaagggt
gccgttatcctgcctgtctatctcgctaaaggaattgaatttgattccgtatttatccat
gatgcctcgagctctgcattccataaggccagcgagagaaaccttttttatactgcatgc
acacgcgccatgcacaagctttatgttttttttgtaaacgaaccgagcccttttatttca
aggatgcctacgagtaaatatatttttaaaaaaatctaa
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