Paraperibacillus esterisolvens: V1501_18340
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Entry
V1501_18340 CDS
T11219
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pest Paraperibacillus esterisolvens
Pathway
pest02020
Two-component system
pest02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pest00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V1501_18340 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V1501_18340 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pest03021
]
V1501_18340 (rpoN)
Transcription machinery [BR:
pest03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V1501_18340 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_3
Sigma70_r4
HTH_10
HTH_Crp_2
MarR_2
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_24
HTH_IclR
HTH_20
HTH_17
LacI
HTH_26
TrmB
HTH_AraC
Death
HTH_5
DUF2774
Phage_CII
MarR
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
XNY71932
LinkDB
All DBs
Position
complement(3632559..3633872)
Genome browser
AA seq
437 aa
AA seq
DB search
MELGNGLFQQQGLRLSMTQELSQAIALLQYSSQELASFLEERAVENPLVQLEPVSSYVGG
AGAGRRRQREQDASYWLEQIGGPPVSLHDYLWIQVGLQNRREDEKRVLKGLILNLDQNGY
LRADLSDVAGKAGCDTEMVERCLGYIQGLEPAGVGARSLQECLLLQAERMTGAKQHAEAV
LREHFMLFADKRWKDLAKKLGITLQDIQEVQDFVLTLNPRPGAAFQSEKPAYAVPDVKVE
HRDGRLQVALVERGSGWSLNQDYYEFLKSSREHGVGKFLQEKWQEYQWISKSLLQRRETI
LRVTKLIVEKQEHCFRKGLASLKPMTMKEVADELGIHESTVSRAVRDKFVQAPFGTVELR
AFFSAQIQSVSSGEMSAEAVKRELVGLIESEEKTRPLSDQDLSDILKKEKGILLSRRTVA
KYRDLLNIPSSSKRKRY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaactggggaatgggttgtttcagcagcagggtctgcggctttcgatgacgcaggag
ctgagtcaggcgattgctttgcttcagtattcgtcgcaggagctggcgtcttttttggag
gagcgggcggtggagaatccgcttgttcagctggagccggtgtcttcatatgtgggaggt
gcaggcgcagggcggcggaggcagcgtgagcaggatgcgtcttattggcttgagcagatc
ggcgggccgccggtttcgcttcatgattatttgtggattcaggtggggctgcagaatcgg
cgcgaagacgagaagagggtgctgaagggcctgattctgaatcttgatcagaatggctat
ctgcgggcggacctttcggatgtggccggtaaggcgggctgtgatacagagatggtggag
cgctgccttggatatattcagggattggagcctgccggagtgggggcccgaagcctgcag
gagtgccttctgcttcaagcggaacggatgacgggtgcaaagcagcatgccgaagcggtt
ctcagggagcattttatgctgtttgccgataagcgctggaaggatcttgcgaagaagctt
ggtatcacgcttcaagatatccaggaagtgcaggattttgtgctgacactgaatccgagg
ccgggtgcggccttccagtcggagaagccagcgtatgcagtgcctgatgtgaaggtggag
catagggacggcaggcttcaggttgcgcttgtggaaagaggctcgggctggagcctgaat
caggactattatgaattcttgaagtcatcgcgtgagcatggggtgggtaaattcctccag
gaaaagtggcaggagtatcagtggatttctaaaagtctgcttcagcggcgggagactatc
ttgcgggtgacaaagctgattgtagagaagcaggaacattgttttaggaaggggcttgcc
agtctcaagccgatgaccatgaaggaagtggcagatgagctggggattcatgagtcgact
gtgagccgggcggtgcgggataagtttgtgcaggcaccgtttgggacggtggagcttcgt
gcttttttttctgctcagattcaatccgtgtcctcgggtgaaatgtcggccgaagctgtc
aaaagggagcttgtgggtctgattgaatccgaggagaagacgaggccgttatcagatcag
gatctttctgatatattaaaaaaggaaaaaggaattcttctttcgaggaggacggttgcc
aagtaccgcgaccttctcaacataccttcttcttccaaacggaagcgatattag
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