Petrimonas sp. IBARAKI: PEIBARAKI_4049
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Entry
PEIBARAKI_4049 CDS
T05132
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pet
Petrimonas sp. IBARAKI
Pathway
pet03030
DNA replication
pet03410
Base excision repair
pet03420
Nucleotide excision repair
pet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PEIBARAKI_4049
03410 Base excision repair
PEIBARAKI_4049
03420 Nucleotide excision repair
PEIBARAKI_4049
03440 Homologous recombination
PEIBARAKI_4049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pet03032
]
PEIBARAKI_4049
03400 DNA repair and recombination proteins [BR:
pet03400
]
PEIBARAKI_4049
Enzymes [BR:
pet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PEIBARAKI_4049
DNA replication proteins [BR:
pet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PEIBARAKI_4049
DNA repair and recombination proteins [BR:
pet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PEIBARAKI_4049
NER (nucleotide excision repair)
GGR (global genome repair) factors
PEIBARAKI_4049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
RNase_H_2
DNA_pol_lambd_f
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
BBD44056
UniProt:
A0A3G9DYN9
LinkDB
All DBs
Position
complement(71485..74277)
Genome browser
AA seq
930 aa
AA seq
DB search
MSKQKLFLLDAYALIYRAYYAFIKNPRVNSKGQNTSAIFGFVNTLEEVLKKENPSYIAVA
FDPPGPTFRHTEFEAYKAQREATPEDIKASVPLIKKILEAYNIPVLEKEGFEADDVIGTL
AKKADKDKFDVYMMTPDKDYGQLTEQHVFIYKPKYGSNEFEILDDKKVMEKYRVSHPSQV
IDLLGLMGDTSDNIPGCPGVGPKTAEKLLEEFGSVENLLENSDKLKGTLRTKIEENKEQI
LFSKFLATIRTDVPIETSIESLKRKELNETAIKEIFEELEFRTLINRVLKIEPQKPIGKQ
PVQGDLFSGFSDVLEEVKTAPVELPGSFSDIHSTRHTYKLLETEQELTELNQQLCAQQTV
CFDTETTGIDPLLSDLVGLSFAYTEGEAFYVPISENREEAQKQVDIFRPFFENDRIEKIG
QNLKYDILSLRHYGISVKGKLFDTMIAHYLLNPELRHGMDYMAETYLKYKTIHIEELIGP
KGKNQKSMRDVDKQVVCDYAAEDADITLKLKNMLEEEIRQNNFDYLFYEVESPLVYVLAD
MEWTGVRLDLDALAQLSEEFTAELQQVEAEIIAMAGEEFNVNSPKQIGEVLFEKMKIIEK
PKKTRTGQYSTSEDELQKLRNKHPVIEKILEQRGLKKLLGTYIDAFPLLVNPRTGKVHTS
FNQTVAATGRLSSTNPNLQNIPIRDERGKEMRRVFIPDEGCTFLSADYSQIELRIMAHLS
EDKNMLEAFNQGLDIHTATAAKINHIPVEEATSDMRRKAKTANFGIIYGISVFGLSERLN
IPRGEAKALIDGYFATYPGVKRYMDESIADAREKGYVETVLGRKRFLADINSKNAVVRGY
AERNAINAPIQGSAADIIKVAMIRIFNRLEKEGLQSKMILQVHDELNFNVPANELERMKK
IVVEEMENAYKLRVPLKTDCGVGDNWLEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacagaaactgtttctactcgatgcttatgcgttgatttacagagcatattat
gcatttattaaaaaccctcgcgttaattcgaaaggacagaatacatcggcaattttcggg
tttgtgaatacgttggaagaagtgctgaaaaaagagaacccgtcgtacattgccgttgct
ttcgatcccccgggacccacattccgtcatacggagtttgaggcctacaaagcacagcgc
gaagccactcccgaagacataaaagcttcagtccccctcatcaaaaaaatcctggaagcc
tacaacataccggtgcttgaaaaggaaggcttcgaagctgacgatgtaatcggaaccctg
gccaaaaaggcggataaagataagtttgacgtttatatgatgactccggacaaggattac
ggacaattgacggagcagcatgtatttatctataaacccaaatacggcagtaatgagttc
gagatactggacgataagaaagtgatggagaaataccgcgtttcccacccatcacaggta
atcgatttgctgggcctgatgggcgacacgtccgacaatattcccggctgcccgggtgtg
ggacctaaaacagcggaaaagctgttggaagagttcggatccgttgaaaatctgcttgaa
aacagtgataaactgaaaggaacgctacgtacaaaaattgaagagaacaaggaacagatt
ttattttcaaaatttttggccacgataaggacagatgttcctatagagaccagtatcgaa
agcttgaaaagaaaagaactgaacgaaacagccataaaagagatattcgaagaactggaa
ttcaggacattgataaacagggtactgaaaattgaaccccaaaaaccgattggtaaacaa
cccgtccagggcgacttgttcagtggcttcagcgatgttttggaagaagtaaaaacggct
ccggttgaactcccgggcagcttctccgacatccactccaccaggcatacgtataaatta
ctggaaacggaacaggaacttacagagttgaatcaacaactttgcgcacagcaaacggtt
tgcttcgataccgagacaaccggaatcgacccgctgttgagcgatctggtgggcctatcg
tttgcatacactgagggcgaagcgttttacgtgcccatttccgaaaacagggaagaagcg
caaaagcaagtagatattttcaggccttttttcgaaaatgaccggatcgaaaaaattgga
caaaacctcaaatacgatatcctctcccttcgccattacggcattagcgtaaaaggaaaa
ctcttcgatacgatgattgcgcattatctcctcaatcccgaactccggcacgggatggat
tacatggcagaaacctacctgaaatacaaaaccatccatattgaagagctaatcggtcca
aaaggaaaaaatcaaaaatcaatgcgtgacgtggataaacaagtcgtttgcgattacgcg
gcagaagacgccgatatcacgctgaagttgaagaacatgctggaggaggagatcagacaa
aacaacttcgattacctcttttacgaagtggagtcgcccctcgtttatgtacttgccgat
atggaatggacgggtgttcgtctcgatctagacgcgttggctcaactttcggaagaattt
accgccgagctgcaacaagttgaagcggaaatcatcgctatggccggggaggagttcaac
gtaaattcacccaaacaaataggggaagtgcttttcgaaaagatgaaaattatcgaaaaa
ccaaaaaaaacccggaccgggcaatacagtaccagcgaagatgaattacagaagttgcgc
aacaaacatcccgttatcgaaaaaatactggagcaacggggattgaagaaactgctggga
acctatatcgatgcttttcccttactggtaaatccccggacgggaaaagtacacacctcc
ttcaaccaaaccgtcgctgcaacgggacgactgagcagcaccaaccccaatctgcagaac
atacccattcgcgatgagcgcggtaaagaaatgagacgcgttttcatcccggacgaaggg
tgcacgtttctttccgccgactattcgcaaattgaactccgcatcatggcgcacctgagc
gaagataaaaatatgctggaagcctttaaccagggactggatattcataccgccacagcc
gccaaaatcaatcatatccccgttgaagaagccacttccgacatgcggcgcaaggcaaaa
accgccaattttggaattatttacggcatttcggtcttcggactttccgaacggctgaat
atccctcgtggggaagccaaagcacttatcgacggttatttcgccacctatcccggcgtg
aaacgctatatggacgaaagcattgccgacgcacgcgaaaaaggttatgtggaaaccgtg
ttgggacgcaaacgttttttggccgacatcaattccaaaaacgccgtcgttcgtgggtat
gcggaaaggaatgcgataaacgcacccattcaggggagtgcggcagacattataaaagtg
gcaatgatccgcatctttaaccggctggaaaaggaaggactgcaatcgaaaatgattctt
caggtacacgacgaacttaacttcaacgttccggcaaacgaactggaaaggatgaaaaaa
attgttgtcgaggaaatggaaaacgcctataaactccgtgtccctctgaaaacggattgt
ggagtgggggataactggctggaagcgcattga
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