Petrimonas sp. IBARAKI: PEIBARAKI_4059
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Entry
PEIBARAKI_4059 CDS
T05132
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
pet
Petrimonas sp. IBARAKI
Pathway
pet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PEIBARAKI_4059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pet03400
]
PEIBARAKI_4059
DNA repair and recombination proteins [BR:
pet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PEIBARAKI_4059
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
HHH_5
HHH_2
UVR
DUF7508
OVT1
DUF6846
LpxI_C
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
BBD44066
UniProt:
A0A3G9DYP7
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Position
complement(85226..87016)
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AA seq
596 aa
AA seq
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MTQEIRDTLKILPQGPGCYQFLDEKGRIIYVGKAKNLKKRVSSYFNKHQENPKTRVLVRN
IRQIKYIVVNTEEDTFLLENNLIKELKPRYNVMLKDDKSYPSIVIKNEFFPRVFKTRNIV
KDGSKYFGPYTSVAAVDALIEVFRKIYKVRTCRLNLTPENISAGKFKVCLEYHIKRCDAP
CVGYQSLENYNKNIAEITEILKGNISLIEKQITIEMQHYSDELRFEEAQRLKEKLLLIRN
FREKSQVVSNVHYNLDVYGFAEDENAAYINYLHVVNGGIIQAYTFEYKKKLDETPEELLG
LGIVEMRQRFGSESKEIMVPFIPDLILSGVEFIVPIRGDKRKLLDLSEKNVKQFKVDKLK
KSEMLNPEQRTTRILKTVQKDLHLKEIPWHIECFDNSNIQGTDPVAACVVFKKAKPSKKD
YRHFNIKTVVGPDDYASMAEIIHRRYSRAVNEGHSLPQLIVIDGGKGQLHAATESLQKIG
LYGKIAIIGIAKRLEEIYFPEDSVPLYIDKNSETLKLIQRLRDEAHRFGITHHRNRRSKS
QVTSELDQIKGIGKETKKKLLSHFKSVKRIKETREEEIASVVGKSKGKLITDFFKK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagagatacgggatacactaaaaatacttcctcagggaccaggctgctaccaa
tttttagacgaaaaaggcagaataatctatgtgggcaaagccaagaacctgaagaaaaga
gtatcctcgtatttcaataaacaccaggaaaaccctaaaacccgcgttctcgtccggaat
atccgacagataaaatatattgtggttaatacggaagaagacacatttcttctcgagaac
aatcttatcaaagagctgaagccacgttacaacgtgatgctgaaggacgataaatcctac
ccttccatcgttataaaaaacgaatttttcccacgggtttttaaaacaagaaatatcgta
aaggatggctcaaaatactttggcccgtacacttccgttgctgcggtcgacgccctgatt
gaggtttttcgaaaaatttacaaagtaagaacctgcaggctcaatttaactcccgaaaac
atctctgccgggaaattcaaggtttgcctcgaatatcacattaaacgatgcgatgctccc
tgcgttggatatcaatcactggaaaattacaacaaaaacattgcagagattaccgaaatt
ctgaaaggaaacatctcccttattgagaaacaaataacgattgaaatgcagcactactcc
gatgagctccgttttgaagaagcacagcggctcaaggagaaacttctgctgatccggaat
ttcagggagaaatcgcaagtggtaagcaatgttcattataacttggatgtctatggattt
gcggaagacgaaaatgcggcttacatcaactatctccacgtggtgaatggcggtataatc
caagcgtacacttttgaatacaagaaaaaactggatgaaacacccgaagaactgctgggg
ttaggaattgtggaaatgcgtcaacgcttcggtagtgaatcgaaagagatcatggtcccc
ttcattcctgatcttattctttccggagttgaatttatcgttcctatacggggagacaag
cgaaaactcctggacctttccgagaagaacgtcaagcagtttaaagtagacaaactgaaa
aagtcagagatgctgaatccggagcagcgaaccacacgcattttaaagacggttcagaaa
gatctgcatctgaaagagattccatggcacatcgaatgttttgacaattcaaacattcaa
ggtacagatcccgtggcagcttgtgtggttttcaaaaaagcaaagccatcaaaaaaagat
taccgccatttcaacattaaaaccgtcgtaggtcccgatgattacgcctcgatggccgaa
attattcacagacgctattctcgtgcagttaacgaaggtcactctttgcctcaactcatt
gtaattgacggcggtaaagggcaactccacgctgcaacagaatcgcttcagaaaattgga
ctttacggcaagatcgccattattggaattgcaaagcgattggaagaaatatatttccct
gaagactccgtcccgctctacattgacaaaaattctgagacactaaaactcattcaacga
cttcgcgacgaagctcatcgtttcggtattactcatcaccgaaacagaagaagtaaatcg
caggtgacttccgaactggatcaaataaaaggaatcggaaaagaaaccaaaaagaaactt
ctttcacactttaaaagcgtgaagcgcataaaagaaacccgtgaagaagaaattgcttca
gttgtcggaaaaagcaaaggaaaactgattaccgatttttttaaaaaataa
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