Petrimonas sp. IBARAKI: PEIBARAKI_4088
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Entry
PEIBARAKI_4088 CDS
T05132
Name
(GenBank) Ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pet
Petrimonas sp. IBARAKI
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pet03016
]
PEIBARAKI_4088
Enzymes [BR:
pet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PEIBARAKI_4088
Transfer RNA biogenesis [BR:
pet03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PEIBARAKI_4088
Prokaryotic type
PEIBARAKI_4088
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
BBD44095
UniProt:
A0A3G9EDL6
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All DBs
Position
121156..122070
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AA seq
304 aa
AA seq
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MTRFEITILGCGSAMPTTLHNPSSQLVNVNEKLFMIDCGEGTQLQLRKYKTRINKLHSIF
ISHLHGDHVFGLPGLLATLSLLGRTGDLNIYAHKDMELFLDPFIKHFGNQFPYKINLTPL
DPYQHQLIFENNSIRVFSFPLKHRIPTSGFLFEEKDRPRHIKREMIDFYNIPVCKINEIK
KGGDYLTDDGRWIKNEILTTPAIPPRTYAYCSDTAYSPEIIPYIQHSDVLYHEATFAEAE
NLRAQETYHSTARQAAEIARSANVRKLIIGHFSSRYHELGELLDEAQAVFPETELADEGM
TINL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgactcgctttgaaataacgattttaggttgtggttcggcaatgccaaccacgctgcat
aacccttcttcgcaactggtcaatgtaaacgaaaaactctttatgatcgattgcggtgaa
ggtacccagcttcagttgcggaagtataaaacccggataaacaagctgcacagcattttc
atatcccatttgcacggcgaccatgttttcgggcttcccggattgctggctacactgagt
ttattgggaaggaccggcgatttgaatatctacgcgcacaaggatatggagttgtttctc
gaccctttcatcaaacacttcggcaaccagtttccgtacaaaataaacctcactcctttg
gatccttatcaacatcaactgatcttcgaaaacaactccatacgcgttttttcgtttcct
ttgaagcaccggatacccaccagcggatttttattcgaagagaaagaccggccccgtcac
atcaagcgggagatgattgacttttacaacattccagtctgcaagataaatgagatcaaa
aaagggggtgactacctgactgatgatggaagatggattaaaaatgaaattctcactact
ccggccattccacccaggacctatgcttattgttcggatactgcctattctcccgaaatt
attccatacattcaacattccgatgtgctgtatcacgaagctacctttgctgaagccgag
aacctgagagcgcaggagacgtaccattccactgcacgacaggcggccgaaatcgccagg
tcggcaaacgtgagaaaacttattatcggtcatttttcgtcacggtaccatgaattgggc
gaattgcttgacgaagcccaggccgtttttcctgaaacagaactggctgatgaagggatg
acgattaatctttaa
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