Petrimonas sp. IBARAKI: PEIBARAKI_4118
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Entry
PEIBARAKI_4118 CDS
T05132
Name
(GenBank) Exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pet
Petrimonas sp. IBARAKI
Pathway
pet03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PEIBARAKI_4118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pet03400
]
PEIBARAKI_4118
Enzymes [BR:
pet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PEIBARAKI_4118
DNA repair and recombination proteins [BR:
pet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PEIBARAKI_4118
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BBD44125
LinkDB
All DBs
Position
complement(151477..152718)
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AA seq
413 aa
AA seq
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MPENSLSLSELNGQVSDAIRDHLPDTYWVRAETSDVRLNRNGHCYLEFIEKDARGQNIVA
RARGVIWNNVYEMLSSYFETETGQPFVSGLSILVRVSVDFHELYGFSLSVVDIDPSFTIG
EIARNRQLVLRKLEEEGVLTLNKELTLPELTNRIAVISSPTAAGYEDFCDQLAKNPYGFV
FYTRLFPAIMQGERSEPSVIAALEKIYAHKEHFDAVTIIRGGGSSSDLSCFDSYYLATNC
AQFPLPVISGIGHERDITVIDIVAHTRAKTPTAVAELLISHASKTAVELMDLQQRLVEKS
GLILQSLQDKLGELSRRMIHSSRFFVREELSVVQQLSIILNHQAKRLLQAENHSVAEKSQ
YIHMASPENILKRGYTLTLKNGKIIKSATELSGDDIIETLFTDGKAESIITKK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaattcactttcgttatcggaactcaacggtcaggtgagtgacgccatccgc
gaccacctgcccgacacctattgggtacgtgccgaaaccagtgatgtgcgcctcaaccgg
aacgggcattgttatttagagtttattgaaaaagatgccaggggacaaaacattgttgcg
cgcgcgcgtggagttatttggaacaatgtgtatgaaatgctttcgtcctatttcgagacg
gagacaggacagccatttgtatcgggattaagtattttggtacgggtctcggtggatttt
cacgaactgtacggcttctctctctcggtggtggatatagatccttcgttcactatcggc
gaaattgcccgaaaccggcaactcgttctcaggaagttggaggaagaaggcgtcttaacg
cttaacaaagagcttacgcttcccgaactgacgaaccggattgcggtaatttcatcgcca
acagccgccgggtacgaagatttctgcgatcaattggcaaaaaacccgtacgggtttgtg
ttttatacccggttgtttccggcaatcatgcaaggggagcggagtgaaccgtcggtaatc
gctgccctggaaaaaatttacgcccacaaagaacacttcgatgccgttaccattattcgc
ggcggcggttcttcgtccgatttaagttgttttgattcttactatctggcaaccaactgt
gcgcagttcccgcttcctgtaatcagcggaatcggccacgaacgagacatcaccgtgatt
gatatcgttgctcacacgcgggcaaaaactccgacagcagtagccgaactcctgatttct
cacgcctccaaaacggccgtcgagttgatggatttacagcagcgtctggtagaaaagagc
ggccttatcttgcaaagtttgcaggataagctgggcgaattatcgcgtcgaatgatccat
tcctcccgtttttttgtccgggaagaactttctgtagtgcagcagttatcgattattctc
aatcaccaggccaaacgtttgctacaagcagaaaatcactctgtggccgaaaaaagtcaa
tacatccacatggcgtcacccgaaaatatcctgaaacgggggtatacattgacattgaaa
aatggaaaaatcattaaatcggcaacggagctttcgggggatgatattatcgagaccctt
tttacagatggaaaagcagaatcaataatcactaaaaagtaa
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