Petrimonas sp. IBARAKI: PEIBARAKI_4266
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Entry
PEIBARAKI_4266 CDS
T05132
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
pet
Petrimonas sp. IBARAKI
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
PEIBARAKI_4266
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
HHH_9
Tex_N
S1
HHH_7
YqgF
S1_RRP5
T2SSK
ATP-synt_ab_C
OB_PDCD11
HHH_6
HTH_36
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
BBD44273
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Position
348609..350738
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AA seq
709 aa
AA seq
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MNSPVIPSLISNALNIRLNNVENTIKLLEGGATIPFISRYRKEATGSLDEVQVSEIKSLN
DKFIELEKRKKTVLSSIEEQERLTPELQERIENCWDAVALEDIYLPYKPKRQTRAEMARK
RGLEPLAKWLMLQQYGPVEAKAGQFAGEELDDAVSALKGACDIIAEWVNEDEKARQLIRN
IFAREAVITAKVVKGKEQEGEKYRDYFDFSTLLSRCPSHRLLAIRRGESEGFLRVSISPD
DEKCLDKLVPRYAKNDSEAADYVEKAVEDAYKRLLKPSIETEFANLSKEKADEAAIAVFA
ENLRQLLLSPPLGQKRILAVDPGYRTGCKLVCLDEQGNLLHNETIYPHPPQNEFSKSAGK
VSKLVSTYRIDAIAIGNGTASRETERFIANLRYDREVKVFVVSENGASVYSASKTAREEF
PEYDVTVRGAISIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQAKLKRSLDQTVESCVNL
VGVNLNTASKHLLMYVSGLGESLAQNIVNYRAENGPFRARAGLRKVPRLGEKAFEQCAGF
LRIPDAENPLDNSAVHPESYPVVERMAKDLKCSVKEVISNKALVGTIDINRYKTDTIGTE
TLTDILQELEKPGRDPRTKVQVLEFDPSIRTIADVKEGMVVNGIITNITNFGCFVDFGIK
ENGLVHISELAGRFVSNPTDVVSLHQHVKVKVLSVDLERKRIQLSMKDA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtcccgtcatcccttcacttatttccaacgctttaaacatccgcctcaataat
gtggaaaataccattaaactgttggaaggcggtgctaccatcccttttatcagccgatac
cggaaagaagcaaccggatcgttggatgaagtacaggtttcagaaattaaatcactgaat
gataaattcattgagctcgaaaaacggaagaaaaccgttctgtcgtccatcgaagaacag
gaaagactgacaccggaactgcaagagaggatcgaaaattgctgggatgccgttgcgttg
gaggatatttacctgccttacaaacccaaacggcagacgcgcgcggagatggccaggaaa
aggggattggagcctttggcgaaatggctgatgctgcaacagtatgggccggttgaagcg
aaagccgggcagtttgccggagaagaacttgatgatgccgtttcggcgttaaaaggggcg
tgcgacattattgccgaatgggtaaacgaagatgaaaaagcccgtcagctcatacgaaac
atttttgcccgtgaagcggtcataaccgccaaagtggtgaaaggcaaagaacaggaaggc
gaaaagtacagggattattttgacttttctactcttctttcccggtgtccctcgcatcgt
cttcttgccatccgccggggagaatcggaagggtttcttcgggtatccatctctcccgac
gatgaaaaatgcttggataagctggtgccccgatacgccaagaacgatagtgaggctgcg
gattacgttgaaaaagcggtggaggatgcctataaacgcttgctcaaaccttccattgag
actgagtttgccaacctctccaaggaaaaagccgacgaggccgctatagctgtttttgcc
gagaatctgcgtcagcttctgctttcacctccactggggcagaagcggatactggcagtc
gacccgggataccggacgggatgcaagcttgtttgtctggacgagcaaggcaatttactg
cacaacgaaaccatttatccgcatccgccgcaaaatgaattttcgaagtcggcgggtaag
gtttccaagctggtttccacttaccgtatcgatgcgattgccatcggcaacggtacggca
agccgggagaccgagcgcttcattgcgaacctgaggtacgaccgggaggtgaaggttttt
gtagtgagtgagaacggtgcctccgtatattcggcctcaaagacggcacgtgaagagttc
ccggagtatgatgttacagtgcgcggggcaatctctatcggcaggaggttaagtgatccg
ctcgcggaactggtgaaaattgatccgaaatccataggggtggggcagtatcagcacgat
gtggaccaggcaaaactgaaacgttccctggatcaaaccgtggaaagttgcgtgaacctt
gtgggggtaaaccttaacacggcgagcaaacatttgctgatgtatgtttcgggtctaggt
gagtccctggcacagaatatcgtgaattaccgggccgagaacggtcctttccgcgcacgc
gcaggattaaggaaagtaccccgtctgggtgaaaaagctttcgagcaatgtgccggtttc
cttcggattcccgacgctgaaaacccgctcgataactctgccgtccatccggaaagttat
ccggtggttgaaaggatggccaaggaccttaaatgttccgtcaaggaggtgatcagtaat
aaagcgcttgtcggtactatcgatatcaaccgctacaaaacagataccatcggtaccgaa
acgctgaccgatatcctccaggagctggaaaagcccggccgcgatccacgcacgaaagtg
caggtgttggagtttgacccctctatccgtaccatcgcagacgtgaaagaaggaatggtg
gtaaatggaatcattaccaatatcactaacttcggttgtttcgtggatttcggcatcaag
gagaacggcttggtccatatctcggaactggccggccgcttcgtatcaaaccccaccgat
gttgtttcgttgcaccagcacgtgaaagtaaaagtgttgtcggtagatttggaacggaag
cggatccagttgagcatgaaggatgcatga
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