Petrimonas sp. IBARAKI: PEIBARAKI_4297
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Entry
PEIBARAKI_4297 CDS
T05132
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pet
Petrimonas sp. IBARAKI
Pathway
pet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PEIBARAKI_4297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pet03400
]
PEIBARAKI_4297
DNA repair and recombination proteins [BR:
pet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PEIBARAKI_4297
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_29
RsgA_GTPase
AAA_27
SbcC_Walker_B
DrmE_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BBD44304
UniProt:
A0A3G9EA50
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Position
complement(379896..381002)
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AA seq
368 aa
AA seq
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MTLKHLSIINYKNLAQVELKLSPKINCFVGNNGMGKTNLLDAVYYLSFCRSYTNPVDSQI
IKHDADVCMLQGRYELEGQDGEEEIYCGLRRRQKKQFKRNKKEYEKLSDHIGFIPLVMIS
PADIEIIQGGSEERRKFMDMAISQFDKAYMHALIRYNNALQQRNATLKMDDNEIDFTLLE
LWEDQMAGEGELIFEKRQAFVKEFIPVFDEFYKRISLSNEKATFDYVSQLRENNFREALR
QTRRRDIAVGHTTTGIHRDELEMLLDGFPIKKVGSQGQNKTYFVSMKLAQFHYLLKTGKR
TPILLLDDIFDRLDAYRVEEIVKLVSSNEFGQIFISDTNRGSFDKILERINNSHHIYSVK
DGEITVYA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacattaaagcatttatccattataaattacaaaaacctggctcaggttgagctgaag
ttatcgcccaaaataaactgttttgtgggaaataacggcatgggtaaaaccaatttgctg
gatgccgtttactacctgtcgttctgccggagttacaccaacccagtcgatagtcagatc
atcaaacacgacgccgatgtttgcatgcttcagggaaggtacgagctggagggacaggat
ggtgaggaagaaatctattgcggattgcgccggcggcagaaaaaacagttcaagagaaac
aaaaaggagtacgaaaaactctccgaccacattggatttattccactggtgatgatttct
cctgccgatatcgagataatccaggggggtagcgaagaacgacggaaatttatggacatg
gctatttctcagttcgacaaagcgtatatgcacgccttgatccggtacaacaatgccttg
caacaacgcaacgcaacattgaaaatggacgacaacgaaatcgatttcaccttgctggag
ctttgggaagaccagatggcgggagaaggggagctcatttttgaaaaacgacaagcgttt
gtaaaagagtttattcccgtttttgacgagttttacaaacgaataagtttatccaacgaa
aaggcgactttcgactacgtttcgcaacttcgcgaaaacaatttcagggaagcgctgcga
caaacccgccgtcgcgatatcgcggtgggacacaccaccaccggtattcaccgcgatgaa
ctggagatgttgctcgacggatttcccataaagaaagtgggttcgcaagggcaaaacaaa
acctacttcgtatcgatgaagctggcacaatttcattacctgcttaaaactgggaaacgg
acacccattttgctgctggacgatatcttcgacaggctggatgcctaccgggtggaagaa
attgtcaaactggtttcgagcaatgaatttggccagatttttatctccgataccaaccgg
gggtcgttcgataaaatactggaacggatcaacaacagccaccacatctattcggtgaaa
gacggggaaataacagtttatgcttaa
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