Petrimonas sp. IBARAKI: PEIBARAKI_4602
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Entry
PEIBARAKI_4602 CDS
T05132
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pet
Petrimonas sp. IBARAKI
Pathway
pet00300
Lysine biosynthesis
pet00470
D-Amino acid metabolism
pet01100
Metabolic pathways
pet01110
Biosynthesis of secondary metabolites
pet01120
Microbial metabolism in diverse environments
pet01230
Biosynthesis of amino acids
Module
pet_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pet_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PEIBARAKI_4602
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PEIBARAKI_4602
Enzymes [BR:
pet01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PEIBARAKI_4602
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF7504
Motif
Other DBs
NCBI-ProteinID:
BBD44609
UniProt:
A0A3G9EHL4
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All DBs
Position
754431..755588
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AA seq
385 aa
AA seq
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MIKGQFPVEKFHSLETPFYYYDMDLLRQTLDAVKKEVEGKNYIVHYALKANANPRILREI
ASYGFGADCVSGNEILKALDCGFPASKIAFAGVGKTDKEIKIGLDNGIFCFNVESLPEME
AIDRLASETGNVAPVALRINPNVDAHTHRYITTGLEENKFGLNESDLPKAIDLIEKSKHL
KLIGMHFHIGSQITDLSSFEDLCVKAVELQNWFSQRGISFEVLNVGGGLGINYHHPNHCP
VADFEAYFRLFAKYLKLQENQTLHFELGRSFVAPCGSLIARTTYVKEGTTKKFLITDAGM
SDLIRPALYQAFHHIENISSDKEYETYDVVGPVCESSDVFGEAVLLNQSRRGDFIAIRSA
GAYGETMASMYNCRALPRSYFSDSL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaggtcaatttcccgtcgaaaaatttcattctttggaaacgccattctattat
tacgacatggatttgctgcgtcaaacacttgacgcggtaaaaaaggaggtcgaaggcaag
aattacattgttcattacgcattgaaagcaaacgccaatccgaggatattgcgcgaaata
gcgtcttatggttttggagcggattgtgtgagcggaaacgaaatacttaaagccctggat
tgcggatttcccgcgtcgaaaatagcttttgccggagtagggaaaaccgacaaagagatc
aagatcgggttggataatggtattttttgctttaatgtggagtcattgcccgaaatggag
gccatcgatcggttggcttctgaaacaggaaatgtggctcctgttgcgctgcgaatcaac
ccgaatgtggatgctcacacacaccggtatatcaccaccggactggaagaaaataagttt
gggcttaacgaatcggatttaccgaaggctattgatttgatcgagaaaagcaagcatttg
aagttgatcgggatgcattttcacatcggttcgcagattacggatttatcgtcgtttgag
gatttgtgtgtgaaagccgttgaattacagaactggttttctcagcggggtatttctttc
gaagttcttaacgtagggggtggtttgggaattaattaccatcatcccaatcattgtcct
gttgctgattttgaagcttatttcagattgtttgccaagtacctgaaacttcaggaaaat
caaacacttcattttgagttgggacgatctttcgtcgcaccgtgtgggtcccttatcgcg
aggaccacatacgtgaaagagggtaccaccaaaaagtttctgatcacggatgccggaatg
tccgatttgatccgccctgccctctatcaggcattccatcatatcgaaaacatcagttca
gacaaagagtacgaaacttacgatgttgtcggccccgtttgtgagtcgagtgatgttttt
ggggaggctgtgttgttgaatcaatcccggcggggagattttatcgctatccgttctgcc
ggtgcttacggagagacgatggcgtcgatgtacaattgccgcgcattgccccggtcttat
ttttctgactcgttgtaa
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