Petrimonas sp. IBARAKI: PEIBARAKI_4613
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Entry
PEIBARAKI_4613 CDS
T05132
Name
(GenBank) Mur ligase domain protein/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pet
Petrimonas sp. IBARAKI
Pathway
pet00300
Lysine biosynthesis
pet00470
D-Amino acid metabolism
pet00550
Peptidoglycan biosynthesis
pet01100
Metabolic pathways
pet01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PEIBARAKI_4613
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PEIBARAKI_4613
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PEIBARAKI_4613
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PEIBARAKI_4613
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pet01011
]
PEIBARAKI_4613
Enzymes [BR:
pet01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
PEIBARAKI_4613
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PEIBARAKI_4613
Peptidoglycan biosynthesis and degradation proteins [BR:
pet01011
]
Precursor biosynthesis
Amino acid ligase
PEIBARAKI_4613
Racemase
PEIBARAKI_4613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Vps36_ESCRT-II
M11L
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
BBD44620
UniProt:
A0A3G9EMJ3
LinkDB
All DBs
Position
complement(763605..766073)
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AA seq
822 aa
AA seq
DB search
MKYSILKIASILGIKNQNIAEGEISLLLTDSRKLSSPQETLFFAIETKQNDAHKFISDLY
GSGVRNFVVTKLFPEWKSFTDVNFLKVTNTLHALQKLAAYHRKQFSIPVIGITGSNGKTI
VKEWLYQLLEEDYNITRSPRSYNSQTGVPLSVWEMTENTTLAIFEAGISQPDEMKYLEPV
IRPTIGVFTKLGEAHQENFSSQQQKCMEKMELFVNSNVFIYEEDNKIINQSADRMVLSQK
SFCWSRKDPDAPLYIRKTEKNGNKTTIHYSFLNFEYSVSIPFTDEASIENAISCLAVMLY
LNVKPGTISERMMKLEPVAMRLDVRQGKNNCTIINDTYNSDINSIKIALDFQQQRKVEQS
LKKTLIISDILQTGLLPKSLYKHVAELVQQSGIEKLIGIGHDICENSEVFTVREKHFFRS
TEDFIRSNIWKEFENELILLKGARRYHFEQINELLEQRIHETVLEVDLDALVHNFNFYKS
RISPQTKLICMVKANGYGAGAVEIAKTLQYHRCAYFAVAVAEEGIELRKEGISTPIIVLN
PEVNGFEELFSKDLEPEVYNFRILDAFIREAERRGITNYPIHLKIDTGMHRLGFLPAQIP
ELLERLKSQKGLKVKSVFSHLAASESWMFDSFTQEQIDIIDVAHREIGEKLGYPVWKHIL
NSAGIERFINAQWDMVRLGIGLYGVSASGLNGLKNVSTLKTTILQIQEIPNHETVGYGRK
EALNRDAKIATIRIGYADGLDRKSGNRKGKVWINGKYAPIVGNVCMDLCMIDITGIDAKE
GDSVIVFGENLPVLEVAESIDTIPYEILTSISPRVKRIYVKE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattccatccttaaaatagcctctatactgggcataaagaatcaaaatattgcc
gagggtgaaatatcgctgttgcttaccgacagccgaaaactaagctctccgcaggaaaca
ctgttcttcgccatcgaaaccaaacaaaacgatgcgcacaaattcatttccgatttatac
ggatcgggcgtaaggaacttcgtggtgaccaagctttttccggaatggaaatcctttacg
gatgtcaacttcctgaaagttaccaacacgcttcacgcactgcagaaactagcggcctat
caccggaaacagttcagtatccccgtcatcgggataaccggaagcaacggaaaaaccatt
gtcaaagagtggctgtaccagcttctggaggaagactacaacatcacccgctcaccccgg
agctacaactcccaaaccggcgttccgttgtccgtctgggaaatgaccgaaaacaccacc
ttagccatattcgaagccgggatctcccaacccgatgagatgaagtatctggaaccggtt
atccgccccacgatcggtgttttcacgaagctgggggaagcacatcaggaaaatttctcc
tcacagcaacagaagtgcatggagaaaatggaacttttcgttaacagcaacgtgtttatt
tacgaagaggacaacaagatcattaatcaatcagccgacaggatggtattgtcgcaaaaa
tcgttttgttggtctcgaaaagaccccgatgccccgctttacatccgtaaaacggaaaaa
aacggaaacaaaaccaccattcattactcgttcctcaacttcgagtactccgtctccata
ccatttacagatgaggcatccattgagaacgccatcagctgcctggctgttatgctttac
ttaaacgttaagcccgggacaatctcagaacgcatgatgaaactggagcctgtagcgatg
cgcctggacgtacgtcaaggaaaaaacaactgcaccatcatcaacgacacatacaattca
gacattaattccataaagatcgcgctcgatttccagcaacagcgaaaagtagaacaatcg
ttgaaaaaaacgctgattatctccgatatcctgcaaacggggttattgccgaaatcgcta
tacaaacatgtagcagaactggtgcagcaaagcgggatcgaaaagcttatcgggatcgga
cacgatatttgtgagaacagtgaggtattcactgtccgggagaaacactttttccgctct
accgaagatttcatccggtccaatatatggaaagaattcgaaaacgagctgattctgttg
aaaggcgcccggagatatcatttcgagcagatcaacgagcttctggaacaacggattcac
gaaaccgtactggaggtcgacctggatgccctcgttcataacttcaacttctataaatcg
agaatatccccgcaaacgaaactcatctgcatggtgaaagccaacggatatggagccggc
gccgtggaaattgccaagacgcttcaatatcaccgttgcgcatattttgccgtcgccgtt
gcggaggaaggaattgagttgagaaaggaaggcatttccactccgataattgtgttgaac
ccggaagttaacggatttgaggagttgttttcgaaagacctggaacccgaagtgtataat
ttcaggatattggatgcatttatccgggaagccgaaagacgcggcataaccaactatccc
attcacctgaagattgacaccggcatgcaccggttgggattccttcccgctcagataccg
gaactcctggaaaggttaaaatcacaaaaaggattaaaggtgaagtcggttttctcccac
ctcgctgctagtgaaagctggatgttcgacagctttacacaggaacagatcgatattatt
gatgtcgcccaccgggaaattggggagaaactgggatatcctgtctggaaacacatccta
aattccgcaggcattgaacgatttatcaacgcacaatgggatatggttcgcctgggaata
ggattatacggagtgagcgcaagcggattaaacgggctgaagaacgtctccacactcaaa
actaccattctgcagatccaggagatcccaaaccacgagacggtaggctacggaaggaaa
gaggccctaaaccgcgatgcgaaaatagccactatccgaattggctatgccgacgggctg
gacagaaaatcagggaacaggaaaggaaaagtatggataaacggcaaatatgcccccatc
gtgggaaatgtctgcatggacctctgtatgattgacattaccggcatcgatgcgaaggaa
ggtgattcggtgatcgtcttcggtgaaaacctgccggtattggaggtagccgaaagcata
gacaccatcccttacgaaatcctgacttccatttctccccgtgtaaagcgtatatacgta
aaagaataa
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