Petrimonas sp. IBARAKI: PEIBARAKI_4770
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Entry
PEIBARAKI_4770 CDS
T05132
Name
(GenBank) Hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
pet
Petrimonas sp. IBARAKI
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pet03032
]
PEIBARAKI_4770
03036 Chromosome and associated proteins [BR:
pet03036
]
PEIBARAKI_4770
03400 DNA repair and recombination proteins [BR:
pet03400
]
PEIBARAKI_4770
DNA replication proteins [BR:
pet03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PEIBARAKI_4770
Chromosome and associated proteins [BR:
pet03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PEIBARAKI_4770
DNA repair and recombination proteins [BR:
pet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PEIBARAKI_4770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HTH_24
HTH_5
HU-CCDC81_euk_2
HTH_1
HTH_IclR
DUF937
Rv2175c_wHTH
CEP104-like_TOG
Motif
Other DBs
NCBI-ProteinID:
BBD44777
UniProt:
A0A3G9DTM0
LinkDB
All DBs
Position
954821..955114
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AA seq
97 aa
AA seq
DB search
MTHKELISEMAQRLGLSQSKVSDLLDATVCELNEKLSENTQIFIPHFGVFETRKRSERIS
VNPQTQQRYLVPPSIVATFKPASGIKEQLKTMEEDGK
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaaggaacttatttcagagatggcgcaacggctgggtctttctcaatcgaag
gtgtctgatttgctggatgcgacggtatgtgaactaaatgaaaaactttcggagaataca
caaattttcattccgcattttggagttttcgaaaccagaaagagatctgagcgtatctcc
gtgaatcctcagacccaacagcggtacctggttcctccatctattgtggccacatttaaa
ccggcatcaggcattaaagagcaactgaaaaccatggaagaagatggaaaatag
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