Petrimonas sp. IBARAKI: PEIBARAKI_5201
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Entry
PEIBARAKI_5201 CDS
T05132
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pet
Petrimonas sp. IBARAKI
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pet03400
]
PEIBARAKI_5201
DNA repair and recombination proteins [BR:
pet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PEIBARAKI_5201
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
TrwB_AAD_bind
ResIII
T2SSE
AAA_30
AAA_10
CbiA
AAA_16
AAA_19
AAA_7
Zot
Radial_spoke_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BBD45208
UniProt:
A0A3G9DUA2
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Position
complement(1466342..1467880)
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AA seq
512 aa
AA seq
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MFDNSKRAFIAINDEAEVCLIPKMANRHGLITGATGTGKTVTLQTLSETFSEMGVPVFAA
DMKGDLSGVAKTGGNKESVSKRVDGYKLGEKGFEFKGFPVRFWDVFGEQGHPVRTTVTEM
GPMLLERLLQLNETQGAVLTMVFKIADDNNLLLLDLKDLQKMIQFVGDNRAKYTTEYGNI
SPASIGAIQRALLRLESEGADKFFGEPELVITDFMQTEQGRGVINILAADKLMNSPRVYT
TFLLWLLDDLFNNLPEVGDMDKPKLVFFFDEAHMLFNDMPKPLLEKVEQIVRLIRSKGVG
IYFCTQNPADIPPVILGQLGNRVQHALRAYTPNDQKAVKVAANTFRSNPKFDTEEAITQL
NTGEALVSFLDEKGAPQMVQRANILPPQGQIGPITAGERDQIMKQSLIYGVYEKLVDRES
AFEILSQKQELLAEEREQAEAEKERIRLEKEERRLQAEAERERRAEARRKKEERGIVGDL
LEQVGRSATRQISSQLGRTITRSIFGAFFGKK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaacagcaaacgcgcttttatagccatcaacgacgaggctgaagtttgcctt
atccccaaaatggcaaaccgccacggactaataacaggtgccacaggaacaggaaaaacc
gtcaccttgcaaacactttctgaaacattcagcgaaatgggagtacccgtctttgccgcc
gacatgaaaggcgacctctccggcgtggccaaaacaggcggaaacaaggagagcgtttcc
aaacgcgtggacggttataagttaggtgaaaaaggatttgagtttaaaggcttcccggta
aggttctgggacgttttcggcgaacaggggcatccggtgcggacaaccgttaccgaaatg
gggccgatgttgctcgaacgactgctgcaactgaacgaaactcagggagcggtactgact
atggttttcaaaattgccgacgataacaacctgctgctcctcgacttgaaagacttgcaa
aagatgatccagttcgtaggagacaaccgggcaaaatacaccaccgaatacgggaacatc
tctccggcaagcatcggcgccatacaacgcgcgctgctacgcctggaaagcgaaggcgcc
gacaaattcttcggtgagcccgaactggtgattaccgattttatgcaaacggagcaagga
agaggagtaatcaacattttggccgccgacaaactgatgaactccccacgggtgtatacc
actttcctactttggctgctcgacgacctgtttaacaacttgcccgaagtgggcgatatg
gacaagcctaaactggtttttttctttgatgaagcacacatgctgtttaacgacatgccc
aagccgttgctcgaaaaggtggaacagattgtccgcctcatccgctccaaaggggtaggt
atctatttctgcacgcaaaatcccgccgatatcccgcccgtaattctcggacaactcggc
aaccgtgtgcaacacgcgctccgagcctacacgcccaacgatcagaaagcggtaaaggtg
gcggccaacacgttccggtccaatccgaagttcgacacggaagaggctatcacacaactg
aacaccggcgaagcgctggtgtcgttcctcgatgaaaaaggtgcgccccaaatggtgcaa
cgcgccaatatcctgccgccgcagggccagatcggaccgattacggcaggagaaagggac
cagataatgaagcaatcactcatttatggagtgtatgaaaaactggtcgaccgggaatcc
gctttcgaaattctttcccaaaaacaggaactgctcgccgaagaacgtgagcaggcagaa
gccgagaaagagcgtatccgtctggaaaaagaggaacggaggttacaggcggaagccgaa
cgtgaaagacgcgccgaagcccgcaggaaaaaagaagagcggggcatcgtgggcgatttg
ctggagcaagtgggcagaagtgccacacggcaaataagttcgcaactcggcagaactatc
acccgaagcattttcggcgcatttttcggaaaaaaataa
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