KEGG   Petrimonas sp. IBARAKI: PEIBARAKI_5533
Entry
PEIBARAKI_5533    CDS       T05132                                 
Name
(GenBank) glycine dehydrogenase
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
pet  Petrimonas sp. IBARAKI
Pathway
pet00260  Glycine, serine and threonine metabolism
pet00630  Glyoxylate and dicarboxylate metabolism
pet00670  One carbon pool by folate
pet00785  Lipoic acid metabolism
pet01100  Metabolic pathways
pet01110  Biosynthesis of secondary metabolites
pet01200  Carbon metabolism
Module
pet_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pet00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PEIBARAKI_5533
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PEIBARAKI_5533
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PEIBARAKI_5533
   00670 One carbon pool by folate
    PEIBARAKI_5533
Enzymes [BR:pet01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     PEIBARAKI_5533
SSDB
Motif
Pfam: GDC-P GcvP2_C Beta_elim_lyase Aminotran_5
Other DBs
NCBI-ProteinID: BBD45540
UniProt: A0A3G9ENY6
LinkDB
Position
1854309..1857158
AA seq 949 aa
MEMEHFKTRHIGIKPEDLGNMLQTVGVSSVDELIDQTIPADIRLKKPLSLPKAQSEMEYA
EEIGRIASANRVFTSYIGMGWYDTITPAAIYRNVFENPVWYTSYTPYQAEISQGRLEALL
NFQTAVSELTGLPLANCSLLDEATAAAEAATMMYGLRSRDQVKNNTEILFVDQYIFPQTL
GALRTRMGMAGIEIEVGDYKCFDAEKKYFGAIVQYPNSNGNVEDYRSFVEKAHASDCKVA
VAADLMSLVLLTPPGEWGADIAFGSSQRFGIPMFFGGPSAAFFATRDEYKRSMPGRIIGI
SKDVYGKDALRMALQTREQHIKREKATSNICTAQALLATMASFYAVYHGPEGLKKIAKRI
HSVTSLVADELKELGFKQLNSSYFDTLKLQLPENITQGGVKDLAEMRNINLRYFDTGEIG
ISIDETTDGYRVHELLAVFAMAAGSSKVFMIDEMPEKITLKGDQLRTSDFLSHPNFNNYH
SETELMRYIKRLERKDISLAHSMISLGSCTMKLNAASELLPLGHPGFQKIHPFAPEDQVQ
GYQEMIHELESMLAEITGFTATSLQPNSGAAGEFSGLLVIASYLKSIGQGHRKIVLIPAS
AHGTNPASAVQAGFNPVTVATDMKGNVDMEDLRKKVETHRDDLAAYMITYPSTHGIFEVE
IREMCNIIHEAGGQVYMDGANMNAQVGLTNPGTIGADVCHLNLHKTFAIPHGGGGPGVGP
ICVAEHLVPFLPGHPVMFESGVNAVSAAPYGSAGVLAITYGYIKMMGTDGLTEATKIAIL
NANYLAEKLNDSYGIVYRGANGRVGHELILECRGLKSVSGITETDIAKRLMDYGFHAPTL
SFPVHGTLMIEPTESESLAELNRFVDAMQQIHAEIIEVSRGEYTAEDNVLVNAPHPEYES
VADEWKHAYPRSKAVYPLPFVAENKFWVNVARVDNAFGDRNLVACLCSM
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggaaatggagcattttaaaacccgtcatatcggaattaagccggaggacttgggcaac
atgttgcagaccgtaggagtctcttctgttgacgaactgatcgatcaaactattccggca
gatatccggctaaagaagcctttatcattgcctaaagcacaatccgaaatggagtacgcc
gaagagatcggacgtattgcgtcggcaaacagagtttttacgtcatacatcggtatggga
tggtacgatacgattacgcctgctgccatttaccgcaacgtatttgaaaatcccgtatgg
tacacctcttatacgccataccaggccgagatctcgcagggaaggctcgaggcattgctt
aattttcaaacggcagtgagcgaactgaccggcctgcccctggccaattgttcgctgctg
gacgaagctactgcagctgcagaagcagcaacaatgatgtacgggttgcgaagccgcgat
caggtgaaaaataacacggaaatcctttttgttgatcaatacattttcccgcaaacactg
ggcgccttacgcacgcgaatgggaatggcaggcatcgaaattgaagtgggggattacaaa
tgtttcgatgcggagaaaaaatattttggcgccatcgtacagtatcccaacagcaacgga
aatgtggaagattaccggagttttgtggaaaaagcacacgcatcggattgtaaagtggct
gttgccgcggacctgatgtcgctcgtattgttgacacctccgggcgagtggggagctgat
attgctttcggcagcagccagcgttttgggattcccatgtttttcggtggtccttcggct
gctttttttgccacgcgtgatgagtataaacgcagtatgccggggaggatcattggcata
tcgaaagacgtttacggcaaggatgcactgcgcatggccctgcaaacacgggaacagcac
atcaagcgcgaaaaggccacgtccaatatttgtactgctcaggcattgctggcaactatg
gcctcgttctatgccgtttaccacggacccgagggattgaaaaagattgcgaaacgtatt
cattccgttacctcgctggtggcagatgagttaaaagaactcgggtttaaacagcttaat
agtagctacttcgatacgctaaaactgcagcttcccgaaaatataacgcaaggcggtgtg
aaagacttggctgaaatgcgcaacatcaatctccgttacttcgataccggagaaataggt
atcagtatcgatgaaacaacagacggttatcgtgttcatgaattactggccgtgtttgcc
atggcggcaggaagctccaaggtatttatgattgacgaaatgccggagaaaataacgttg
aagggagatcagttgcgcacctcggatttcctgtctcatcccaacttcaataattatcac
tccgagactgagttgatgcgttacatcaagcggttggaaagaaaagatatatccctggca
cattccatgatttcgctcgggtcatgcaccatgaaactgaatgcggcatcagagcttctc
cctctggggcatccgggatttcagaaaatacacccatttgctcctgaagaccaggtgcag
ggttatcaggaaatgattcatgaattggaatccatgttggctgaaattaccggatttacg
gcaacgagcttacaacccaattcgggtgctgccggagaattttccgggttactggttata
gccagttacctgaagagcattggccagggacatcgcaagatagtgcttatcccggcttct
gcacacggaaccaatcctgccagcgcagtgcaggccggttttaacccggtgactgtggcg
acggatatgaaagggaacgtcgatatggaagatttgcggaaaaaagtagaaacacatcgt
gacgatctcgctgcctacatgattacctatccctctacacacggtatcttcgaagtcgag
atccgggaaatgtgcaacatcattcacgaggcgggcggacaggtttatatggacggtgcg
aacatgaacgcacaggtcgggctaactaaccccggaactatcggagccgatgtttgccac
cttaacctgcacaaaacatttgctattcctcatggtggaggtgggccgggagttggccct
atctgcgtggccgaacatttggtgcctttcctcccgggtcatccagtgatgttcgaatcg
ggcgtgaatgccgtctctgctgctccttacggcagcgcaggcgtgcttgctattacttac
ggatatataaaaatgatgggaacggatggcttaacggaagccactaaaatagctatcttg
aacgccaactatctggctgagaaattaaacgattcttacgggatcgtttatcgcggagcg
aacggcagggtagggcacgagttgattctggaatgccggggattgaaatccgtttccgga
atcacagaaacggatattgccaaacgactgatggattacggatttcatgcgcccacactc
tcgttccctgtccacgggacgttaatgatcgaacctaccgaaagtgaaagccttgccgag
ttgaatcgatttgtggatgccatgcagcaaatccatgccgaaatcatcgaggtctcacgg
ggcgaatacactgccgaagacaatgtactggtaaatgctccgcatcccgagtacgaatcg
gttgccgacgagtggaagcatgcttacccgcgcagcaaggcggtttatccgttgcctttc
gttgcagaaaacaaattctgggtaaatgttgcccgcgtggataatgcgtttggcgacaga
aacctggtagcgtgtttatgcagtatgtag

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