Petrimonas sp. IBARAKI: PEIBARAKI_5636
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Entry
PEIBARAKI_5636 CDS
T05132
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pet
Petrimonas sp. IBARAKI
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pet03032
]
PEIBARAKI_5636
03400 DNA repair and recombination proteins [BR:
pet03400
]
PEIBARAKI_5636
Enzymes [BR:
pet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PEIBARAKI_5636
DNA replication proteins [BR:
pet03032
]
Prokaryotic type
DNA Topoisomerases
PEIBARAKI_5636
DNA repair and recombination proteins [BR:
pet03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PEIBARAKI_5636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SGL
Motif
Other DBs
NCBI-ProteinID:
BBD45643
LinkDB
All DBs
Position
complement(1979306..1981852)
Genome browser
AA seq
848 aa
AA seq
DB search
MIDQEDRVIKINIEDEMKSAYIDYSMSVIVSRALPDVRDGFKPVHRRILFGMSELGNTSD
KPHKKSARIVGEVLGKYHPHGDSSVYNAMVRLAQEWSMRYTLVDGQGNMGSVDGDSPAAM
RYTEARMNKLGEEMLRDIDKETVDFQFNFDDTLQEPTVLPTRIPNLLINGASGIAVGMAT
NMAPHNLTEVINGIIAYIDDREIDTEGLMHYIKAPDFPTGGYIYGYKGVIDAFETGRGRI
VMRGKAEIESGKNHDKIIISEIPYLVNKAEMIRHIADLVGEKRIEGISNVNDESDRQGMR
IVVDVKRDANANVVLNKLYKLTAMQSSFSVNNIALVNGRPEMLNLKRMIELFVEHRHDVV
VRRTKYELRKAEERAHILQGLIIASDNIDEVIAIIRGSSTPQEAIQRLIERFELSDIQAR
AIVEMRLRQLTGLEQDKLHAEFEEIQRLIAHLNDVLNNEELRMQIIKEELIEVRDKFGDQ
RRSEIIFASEEMNPEDFYSDDEMIITISHFGYIKRTPLTEFRTQNRGGVGAKGSQTRDED
FVEYIYPATNHNYMLFFTQKGKCYWLKVYEIPEGTKTSKGRAIQNLLNIDSDDSITAFVR
VLTLDDEEYINSNYLVFGTQSGVVKKTLLEAYSRPRQNGVIAIGLREDDQVISVRLTDGK
KDIIMANRNGRAIRFNEEDVRPMGRTATGVKGMTLDEDGEDYVIGMICMDPDSKDTILVV
SEQGYGKRTMLNDEDGEPVYRITYRGGKGVKTLNITEKTGKLVAIKSVTDDNDLMIINKS
GITIRVKISDIRTMGRATQGVRLINLEKRNDEIASVCKVNSEEEIDEVETVLPEDVDSEE
NFTDEVNE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccaagaagacagagtcattaagatcaacattgaagatgaaatgaagtcggcg
tacatcgattattcgatgtccgtaatcgtttcacgtgcattacctgacgttcgtgacggt
tttaaacccgtgcacagacgtatccttttcggaatgtccgaattagggaacacatcggat
aagccgcacaagaaatcggctagaatcgtaggggaggtactcgggaagtaccatccgcat
ggcgattcatcggtttataatgccatggtgcgcctggcgcaagagtggagtatgcgctac
acgctggttgacggtcagggaaacatgggaagtgttgacggtgacagccctgcggctatg
cgttataccgaagccaggatgaacaaacttggcgaagaaatgttgcgcgatatcgataaa
gaaactgtagattttcaattcaatttcgacgatactcttcaggagccaacggttttgccg
acacggatacccaacctgctcatcaacggcgcatcgggtattgcggtagggatggccacc
aacatggcaccgcacaatttaacggaagtaattaatggaattatagcatatatcgatgat
agagagatagatactgaggggttgatgcattacatcaaggcgcccgattttccaacaggc
ggctacatttatggttataaaggtgttattgatgcttttgaaacgggtaggggacgcatc
gttatgcgtggaaaagccgaaattgaatcgggaaaaaaccacgataaaataatcatttca
gagattccgtatctggtaaacaaagcggaaatgatcaggcacattgccgacctggtgggt
gaaaagaggattgagggaatatcaaacgtaaatgatgagtcggaccgccagggaatgcgt
atagttgttgacgttaaacgagacgctaatgcaaacgttgttcttaacaaactatacaaa
ttaactgccatgcagtcgtctttcagtgtgaacaatattgcgttggtgaatggccgtccg
gaaatgcttaacctgaagcggatgattgaactgttcgttgaacaccgccacgatgtggtt
gtgcgacgtacaaaatatgaacttcgcaaagcagaagaaagggcacacatattgcaaggt
ctgattattgcctccgataatattgacgaggtaattgccataatccgcggttcaagcaca
ccgcaagaggccattcaacggttgatcgaacgctttgagttgtccgatatccaggcacgt
gccatagtagagatgcggttaaggcaacttaccgggctggagcaagataagcttcatgcc
gaattcgaagaaattcaacggttgatcgctcatttaaacgatgtcctgaataatgaggaa
ctacgtatgcagatcatcaaagaggagttgattgaagtgcgcgacaagttcggtgatcaa
cgccgttctgaaatcatttttgcttcggaagagatgaatcccgaagatttttactccgat
gatgaaatgattattaccatctctcattttggttacatcaaacgtaccccactgacggag
ttccgcacgcagaacaggggtggagtaggagctaaagggtcgcaaacaagggacgaagat
tttgtggaatacatttatcccgctaccaaccacaattatatgctcttctttactcaaaaa
ggcaaatgttactggttgaaggtttacgaaattccggaaggaaccaagacatcgaaagga
agagccattcaaaacctgctaaacattgattcagatgacagcatcaccgcttttgtacga
gtgcttaccctggatgacgaagagtacatcaactccaattacctggttttcggaacacaa
tcgggggttgttaagaaaacattgctggaggcttattcgcgaccgcgtcaaaatggggtg
attgccataggattgagggaggatgatcaggtgatttccgtaaggttgactgacggtaaa
aaggacatcattatggctaaccgaaatggccgggctattcgtttcaacgaagaggatgtg
agaccgatgggccgtactgcaaccggagtaaaaggaatgacgttggatgaggacggcgaa
gattatgtaatcggtatgatttgcatggatcccgactcaaaagacactatcctggttgta
tccgaacaagggtacggtaagcgaacaatgcttaatgacgaggatggggaaccggtttat
aggattacctaccgaggcgggaaaggggttaaaacgctgaacattacagaaaagaccgga
aaacttgtcgcaataaaaagtgtaacagacgataatgatttaatgattattaacaaatcg
ggcataacaatacgtgtgaaaatttccgatattcgcacaatgggacgtgctacacaggga
gttcggctcataaacctggaaaaacgaaacgatgaaatcgcttcggtatgtaaagttaat
tccgaagaagaaatagatgaggtggaaaccgttttgccggaagatgtcgatagtgaggaa
aattttacggatgaggtcaacgaataa
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