Petrimonas sp. IBARAKI: PEIBARAKI_5707
Help
Entry
PEIBARAKI_5707 CDS
T05132
Name
(GenBank) Hypothetical protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pet
Petrimonas sp. IBARAKI
Pathway
pet00061
Fatty acid biosynthesis
pet00071
Fatty acid degradation
pet01100
Metabolic pathways
pet01212
Fatty acid metabolism
pet02024
Quorum sensing
pet04146
Peroxisome
Module
pet_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PEIBARAKI_5707
00071 Fatty acid degradation
PEIBARAKI_5707
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PEIBARAKI_5707
09145 Cellular community - prokaryotes
02024 Quorum sensing
PEIBARAKI_5707
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pet01004
]
PEIBARAKI_5707
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pet04147
]
PEIBARAKI_5707
Enzymes [BR:
pet01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PEIBARAKI_5707
Lipid biosynthesis proteins [BR:
pet01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PEIBARAKI_5707
Exosome [BR:
pet04147
]
Exosomal proteins
Exosomal proteins of breast milk
PEIBARAKI_5707
Exosomal proteins of breast cancer cells
PEIBARAKI_5707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BBD45714
LinkDB
All DBs
Position
2071038..2072627
Genome browser
AA seq
529 aa
AA seq
DB search
MSDFQGKTLYFKDFAREIDMLHEYFNSAGIQRGDKIAICGKNSSHWAISFFATLSYGAVA
VSILHEFEKESVQYIVDHSDSKMFFVDEAIWREIDETKIPKAETVLSLDDFSLLKVTSKE
FKIFVSNSFSFFDKKYEKGFFVNDIAFRTDKPEEVAVINYTSGTTSSPKGVMIPYRSLWS
NTRFANDSLDFIHSGDNMICMLPMAHTYGLAFEVLNAISMGFHIHFLGKTPSPKVLLDAF
ARIKPKLVLAVPLIIEKIVIKNVFPKLQKGAAKTLIKIPLLNAVVYHKIRKSLIDVFGGN
LVEVVIGGAALNADVEKFLRKIKFPYTVGYGMTECGPLISYSFWTEFKERSCGKVVDRMQ
VKIDSDDPQNVVGEILTKGTNLMLGYYKNEEATKAVFTEDGWLRTGDLGILDKDNVVFIR
GRNKNMILGPSGQNIYPEEIEDKLNNSPYILESLAIEEKGKIIALIVPDTEVLKAENISP
EQYNPVFDKEINAINAKLANYSKIASFRLQAEEFEKTPKRSIRRFKYQK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactttcagggcaaaacactttatttcaaagattttgcccgtgaaattgatatg
ctgcacgaatatttcaactctgccggcattcaacgcggtgataaaattgcgatatgtggt
aaaaattcgtcccattgggccatctcttttttcgctacgctctcatacggagctgtagca
gtgagtattttgcatgagtttgagaaagaaagtgttcagtacattgtggatcattcggat
tccaagatgtttttcgttgatgaagccatttggagagaaatagatgagaccaagataccg
aaggcagaaactgtcctctcgctcgatgatttttccttgttgaaagtgacatcgaaagag
ttcaagatatttgtgtccaactcgttttcttttttcgacaagaaatacgagaagggattc
tttgtcaatgacattgctttcaggaccgataaaccggaagaagtggctgttataaactat
acatcgggaaccaccagcagcccgaaaggagtgatgatcccttaccggagtttatggtcg
aacacccggtttgcaaacgacagccttgattttatccactcgggagacaacatgatttgc
atgttacccatggctcacacttacggacttgctttcgaggtgctcaacgccatttctatg
ggtttccacatccattttttaggaaaaacgccttctcccaaggtactgcttgatgctttt
gcaagaataaaacccaagctggtattagccgtccctctgattatcgaaaaaatcgttatt
aaaaatgtctttccgaaacttcagaagggagcagccaaaacattgattaaaattccactg
ctgaatgctgttgtttaccacaaaataaggaaatcgcttattgacgttttcggaggaaat
ctggtagaagtcgtcatcggaggagcagctttgaacgcagacgtagaaaaatttctgcga
aaaataaaatttccctacacggttgggtacgggatgaccgaatgtgggccgcttatttct
tactcgttctggacagaattcaaagaacgatcgtgtggaaaggtagtggacagaatgcag
gttaaaattgattcggatgatccgcaaaacgttgttggggaaatcttgaccaaaggtaca
aacctgatgctcggttattataaaaacgaagaagctacaaaagctgtttttacggaagat
gggtggctcaggacaggcgatcttggaatattggataaagacaacgttgtatttatcaga
ggcaggaacaaaaatatgattctcggcccttccgggcaaaacatctatcccgaagagatt
gaagataagctaaacaactctccctatatattggagtcactggcaatagaagaaaagggc
aaaattattgcactcatcgttcccgacactgaggtgctgaaagctgaaaacatatcacca
gaacagtataaccctgtcttcgataaggaaataaacgcaataaacgcaaaactagccaat
tacagcaaaatagcttcattcaggcttcaggccgaggagtttgaaaaaacgcctaagcgg
agcattagaaggtttaagtaccagaaataa
DBGET
integrated database retrieval system
