Petrimonas sp. IBARAKI: PEIBARAKI_6105
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Entry
PEIBARAKI_6105 CDS
T05132
Name
(GenBank) outer membrane protein
Organism
pet
Petrimonas sp. IBARAKI
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Paralog
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
TonB_dep_Rec_b-barrel
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
BBD46112
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Position
2554881..2557907
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AA seq
1008 aa
AA seq
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MAVTIMCMLSSFLIFSQNITVKGKVIDVNKESLIGVTIQVQNTSVGTITDIDGNYILPNV
PSNAKLEVSYVGMKSQIIEVGGRTSIDVILETDTELLDEVVVVAYGTQKARSVTGAMSRI
NTDELVDMPVSNITQKMQGKFAGVQILNNSGEPNGNLSIRVRGQASINAGNNPLVVIDGF
PSSSGLETLSPDEIESISILKDAASTTLYGSRAANGVILVTTKQGRSGKTEITFNANYGI
QDVSSRGMPDVMNAREFAQFKKEYYEDAQKYEGKTTPVPEQYANPASVSEGTDWYKVLLR
TANSQNYNLGLQTGTDVVKSSVNLNYNSTEGTIINSYANRFSVRSNNEFKASDRIIFGMN
LSASYIDRQVQDGIGIDRQIIGSAFLMDPALKYKNEDGTYPISYSPPGMFGNANYYLVLR
DRQNPAKTIRGTVNTYAQVELAEGLKYRISANADMGNFRQERWVPSYVSGGMFSAPPNPA
YGSYNTFNYENWLVENTLTYQKTFNEVHDFDVLLGYSAQKSKDISSTINASNYPSDEIGF
FNAAQTKVGSGGKSAWSMLSWLSRFNYEYMNRYILSFSYRRDGSSRFGANARWANFPSFS
VGWVASEEGFLKDVNNLSFLKLRASWGKVGNNNIGNYTSIASVNNNNYVLDGTIVPGRQL
GNIGNNNLTWETTESWNIGADVSLYKDRVFFMYDYYNKVTNGLLYQIDIPYSSGFSNIQS
NIGEFRFWGHEFTLQTKNLTGAFKWSTDFNITFDRNKAVKLGTNDTPIGGYNNQVDYNRT
AVGKPLGMFYGYVYDGVYMTQEEYDSQPKHASSTVGTVRMKDINGDKKIDSADKTFIGNP
NPDFLYGLTNSFSWNNFDASVVISGSVGNDIMDATYEWTENIDAVFNVRKEVAERWRSVE
NPGKGNIPRTLTGSTELFRYTNSRWVFDGSYLMVKNLTLGYKVPLKSNPFIKSLRFYLTA
QNLLTLTKYPGMNPEVSRSGTGGLSFYGVDHTSYPVSRIYTAGINVSF
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaaccatcatgtgtatgttgtcctcttttttaatcttttcccagaatattacg
gtaaagggaaaagtgatcgacgtaaacaaagagtctttgataggcgtaactattcaagta
caaaacacatcagttggaacaataactgatattgacggtaactatatattacccaacgta
ccgtctaatgctaaactggaagtgtcctatgtggggatgaaatcacaaattatcgaggtt
ggaggaagaacatcgatagacgttattttagaaacagataccgaactgcttgacgaagtg
gttgttgttgcctacggtacacaaaaggcacgttcagtgactggcgccatgagcagaata
aatactgacgaattggttgacatgcctgtttccaatattactcaaaaaatgcaaggtaaa
tttgcaggtgttcaaattctgaacaactccggagaacccaacggaaacctgtccatcagg
gtcaggggacaagcttcgattaatgcaggtaataacccgctagttgtaatagatggattc
cccagcagttcaggattagaaacactgtctcccgatgaaattgaatctatttcaattttg
aaagatgccgcttcaaccacattgtatggctcacgcgcagcgaatggcgtcatccttgtc
actacaaagcagggaagatccggaaaaacggaaatcacgtttaatgcaaattacgggatt
caggatgtgtccagcagaggaatgcctgatgtaatgaacgcccgcgagttcgcccaattc
aaaaaggagtattatgaagatgcacaaaaatacgaaggaaaaacaactcctgtacctgaa
caatatgcaaatcctgcttcggtatcggaaggcaccgactggtataaagtgttattgaga
acagcaaattcccaaaactacaatttgggtttacaaaccggcacggatgtggttaaatcg
tctgtgaatttgaattacaacagcactgaaggaactatcataaactcttatgcaaacagg
ttctctgttcgttcaaacaatgaatttaaagcgtctgaccgcattattttcgggatgaat
ttatctgcatcttacatcgatcgccaggtgcaggacggaatcggtattgacaggcaaatc
attggatctgctttcttaatggatccggcgttgaaatacaagaacgaagatggtacctat
cccatttcctactctcctccgggaatgtttggtaacgcgaattattacttagttctcaga
gacaggcagaaccccgccaaaactattcgcggaacagtaaacacttacgcgcaggttgaa
ctggcagaagggctgaaataccgtatcagtgcaaacgccgatatgggtaacttcaggcag
gaaagatgggtaccgtcatacgtaagtggtggtatgttttctgcgccccccaatccggca
tatggctcgtacaacactttcaactacgaaaactggctggttgaaaatacattaacctat
caaaaaacatttaacgaagttcacgatttcgacgttctcttaggttattcagctcaaaaa
tccaaagatatctcctccactataaatgcatccaactatcccagcgacgaaattggtttt
ttcaatgctgcacaaacaaaagttggaagcggcggaaaatctgcatggagcatgttgtcg
tggctgtcgaggttcaactacgagtacatgaaccgctacatcctctccttctcttacaga
cgggatggaagttctcgttttggagcaaacgccagatgggccaactttccctcattttct
gtgggttgggtggccagcgaagaaggcttcttaaaagatgtcaacaacttgagttttcta
aaattgcgggccagctggggtaaagttggtaacaacaatatcggtaattatacatccatc
gcctctgtaaacaacaataactatgtgctagacggaacaattgttcccggccgtcagtta
ggaaatatcggaaacaacaaccttacctgggaaactactgaatcgtggaacattggtgct
gatgtaagtctatacaaagaccgcgttttctttatgtatgattattacaataaagtaacc
aacggattactttaccagatagatatcccttattcttcaggattctccaacatacaatcc
aacattggtgaattccgtttctgggggcatgaatttaccttgcagacaaaaaatttaacc
ggcgcttttaaatggtcgactgacttcaacatcactttcgacagaaacaaagcagttaaa
ctgggaacaaacgatactccgataggtggttacaacaaccaggttgactataacagaaca
gctgttgggaaaccgttgggtatgttctatggatatgtatatgacggcgtttacatgact
caggaagagtatgattcacagcccaagcatgcctcatcaaccgttggaacagttcgtatg
aaagacatcaacggtgataaaaagattgactcggcagataaaacatttattggtaatccg
aatccggacttcctgtatgggttaaccaactctttcagctggaataacttcgatgcaagt
gtggttatttctggatctgtaggtaacgatattatggatgcaacttacgaatggactgaa
aacattgacgcagtatttaacgtaagaaaagaagtggcagagagatggagatccgtagaa
aatccagggaaaggaaatatccccagaacgcttacgggatcaacggaactgttccgttat
accaactcgagatgggtttttgatggttcctaccttatggttaaaaatctaacattgggt
tataaagtgccgctgaagtcaaatccattcatcaaatccctgcgtttttacctgacggct
caaaacctgcttactctgactaaatatccgggcatgaatcccgaagttagccgcagcggt
acaggcggcctttctttctacggagtggatcatacgtcatatcctgtgtcaaggatttac
acagccgggatcaatgtatctttttaa
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