Petrimonas sp. IBARAKI: PEIBARAKI_6107
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Entry
PEIBARAKI_6107 CDS
T05132
Name
(GenBank) Hypothetical protein
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
pet
Petrimonas sp. IBARAKI
Pathway
pet00946
Degradation of flavonoids
pet01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
PEIBARAKI_6107
Enzymes [BR:
pet01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
PEIBARAKI_6107
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
BetaGal_gal-bd
Glyco_hydro_63
Crystall
Motif
Other DBs
NCBI-ProteinID:
BBD46114
UniProt:
A0A3G9EDF4
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Position
2559610..2562291
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AA seq
893 aa
AA seq
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MKLRKPVEKLICSLIFLSILGCSPSNISKIVDLKCENLRNPLGINTLHPRFSWKNISDKE
GTQQTAYQILVASNTNNLSEEKADLWNSGKVLSPSNILIDYQGSPLHSRELLYWKIRTWD
ENGNISKWSETGTFSIGILDESDWAASYIGYPTENGFQHCPQFRKVFSIEKVNKDDTYLL
HINSLGYHEVFINGQKIGNDVLSPAVSQFNKRSLVNTYDVTPYMTAGENNLIIWLGSGWY
SKGLPGVVGEGPSVKAQLEKFSGQSAENIVVTDNTWLARNSEYTRISDWMSGRYGGEEVS
GNLETQNLLFSEPEKLTWNKASVVEVPKHAVTPQMVEPNRITKEINPSAINKLNDSTFLV
DMGTTLAGWFEITFPQLQDKQQVVLEYSDHLDENGEIVHQGQTDRYIASGSGTEFFRNKF
NYHGFRYVKISNLYEAPNPASVKAYLIHTDFELNSGFECSDTDLNRIHDMVFYTLQCLGL
GGYLVDCPQIERLGYGGDGNASTVTAQTMFNLAPLYSNWLDAWSDVIREDGSMPHTAPNP
YSAGGGPYWCGFIISASWHTYQNYGDISVLEKYYPVMQKWLGYVEKYSVDGLLKRWPNTD
YRNWYLGDWATPDGVGNPNHLDDRSVDLVNNSYLSVCFSQMADIAGYLGKDNDKKYYSEK
KSQLNEVIHDTFFDEQKGLYSTGSQIDLIFPMLAEAVPQHLQGDLIKTLMERTEKEDNGH
LNTGLVGIPVMMEWAAKNNQPEFIYSMLKKKTYPGYLYMLENGATTTWEHWNGARSRIHN
CYNGVGQWFYQSVGGIRQIDGKTAYSEFLIDPQIPSGVTWAKTRINTPKGWVSVHWETVD
NRMKMEVEIPVGSIAKVKCPVSGKEIKINHQLHSPQDGSVELQSGKYSIEYPL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaagaaaaccagtagaaaaactaatctgctcactgatttttttgagcattctc
ggatgctctccaagtaatatctcaaaaattgttgatttgaaatgtgaaaacctgcgcaac
cctttagggataaacacattgcatccacggtttagctggaaaaatatttcggacaaagaa
ggcacacaacaaactgcataccagatacttgtagccagcaacaccaacaacttaagtgaa
gaaaaagccgacctctggaattccgggaaagtgctatctccgtcaaatatactgatcgat
tatcagggtagcccccttcattccagagaattgctctattggaaaattcgtacgtgggat
gagaacggcaacatttctaaatggagtgaaacaggcacattcagcatcgggatactggat
gaaagcgattgggcagcttcctatataggttatcctacagaaaacggatttcaacattgt
ccccaattcaggaaagtgttttcaatagaaaaggtgaataaggacgacacttatctgctt
cacatcaacagcttgggctatcacgaagtgtttattaacggacagaagatcggcaatgat
gtcctctcacctgcagtttctcagtttaacaaacgttcgctggtcaatacctacgacgtt
acgccctacatgacggcaggtgaaaataacctgattatctggttaggcagcggctggtat
tcaaaagggctgccgggagtagtcggggaagggccgtctgtaaaagctcagctggaaaaa
ttctcgggtcaatcggcagaaaatattgtcgtcacagacaatacctggctggctcgaaac
agcgaatatacccggatcagcgactggatgtccggaaggtacggtggagaagaggtttcc
ggaaacctggaaacacaaaacctcctgttctcagaacctgaaaaactgacctggaataaa
gcgtccgttgttgaagtacccaaacacgccgtaacccctcagatggttgaacccaacagg
attacaaaagaaatcaacccctcggcaataaacaagcttaacgacagtacttttctagtg
gatatgggaacaacccttgccggatggttcgagataacttttccccaattgcaagacaag
caacaagttgttctggagtattcggaccacctggacgagaacggagagatagtccatcaa
ggacagacagatcgttacatcgcatctggcagcggtacagaatttttcaggaataagttc
aactatcacggattcaggtatgtgaagatatccaatctttacgaagcacccaatccagct
tctgttaaagcataccttatccacaccgattttgaactcaattccggttttgaatgctca
gacactgatcttaaccgcattcacgatatggtgttttacacgctacagtgcctcggatta
ggcggctacctggtagactgccctcaaattgaaagattgggctacggaggagacggtaac
gcctcaaccgttactgcccaaaccatgtttaacctcgccccgctttacagcaactggctg
gatgcatggtcggatgtgatcagggaagacggcagcatgccgcacaccgcacctaacccc
tattcggcaggaggaggaccctactggtgcggattcattatctcggcgtcgtggcacact
taccagaattacggagacatcagtgtacttgaaaagtattatccggttatgcaaaaatgg
cttggatacgttgaaaagtatagtgttgacgggctgttgaaacgctggccgaataccgat
tacagaaattggtacctgggggattgggctacaccggacggcgttggaaaccccaaccac
ctggatgatagatcggttgacctggtgaataacagctacctgtctgtttgcttcagccag
atggcggatattgccgggtacctgggtaaagacaacgacaaaaagtactattctgaaaag
aaaagtcaactaaacgaggtcattcatgacacgttttttgatgaacaaaaaggactctat
tcaaccggatcgcagattgaccttatttttccaatgcttgccgaagcagttcctcaacac
ctgcagggtgatctgataaaaacattgatggaaagaacggaaaaggaagataacgggcat
ctcaataccgggctcgtaggaatacccgtaatgatggaatgggctgcgaaaaacaaccaa
ccggaatttatttattccatgctgaagaaaaaaacttatcccggatatttatacatgcta
gaaaatggtgccacaaccacctgggagcactggaacggagccaggagcagaatacacaat
tgttataacggcgtggggcaatggttttaccaatcggtgggaggaatccgtcaaatcgat
ggaaaaaccgcgtacagcgaatttcttatcgatccccagatcccgagtggggtaacctgg
gccaaaacccggataaacaccccaaaaggatgggtaagcgtgcattgggaaacagttgac
aaccggatgaaaatggaagtagagatccctgtcggttcaatcgccaaagtaaagtgtcct
gtttcaggtaaggagatcaaaataaaccatcaactgcattccccccaagacggatcagta
gaattacagagcggaaaatattccattgaatatccgttgtaa
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