Petrimonas sp. IBARAKI: PEIBARAKI_6259
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Entry
PEIBARAKI_6259 CDS
T05132
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pet
Petrimonas sp. IBARAKI
Pathway
pet00300
Lysine biosynthesis
pet00470
D-Amino acid metabolism
pet01100
Metabolic pathways
pet01110
Biosynthesis of secondary metabolites
pet01120
Microbial metabolism in diverse environments
pet01230
Biosynthesis of amino acids
Module
pet_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PEIBARAKI_6259
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PEIBARAKI_6259
Enzymes [BR:
pet01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PEIBARAKI_6259
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
DUF3979
Motif
Other DBs
NCBI-ProteinID:
BBD46266
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Position
complement(2760464..2761309)
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AA seq
281 aa
AA seq
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MKFTKMHGTGNDYIYINGFVENIENLSELSLRLSDRHKGIGSDGLVVILPSEDCDFKMRM
FNSDGSESEMCGNASRCIGKYVYEKGLTDKTEITLETLAGVKVLKLWMNEENEVEKVTVD
MGMPVLDASSIPAAFKQSPVIKCLLPVSDDTTYEVTSVSMGNPHAVLFMDKIDELDLPEI
GPVVEHSPYFPNRTNTEFVEVVSDRWLKMRVWERGAGETLACGTGACAAVVAGVLNGLVG
RSATVQLRGGDLEIEWSEDDNRVYLTGDAVTVFEGEIKLDE
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacaaaaatgcacgggaccggtaacgattatatctatataaacggttttgtg
gaaaatattgaaaatctatcggagctgtccttgagattaagcgaccggcacaagggtatt
ggttccgatgggttggttgtgatactgccttccgaagattgtgattttaaaatgcgcatg
tttaactccgacggatcggagtcggagatgtgtggtaatgcttcccggtgcataggaaag
tatgtttacgaaaagggcctgaccgataagaccgagattacgctggaaacgcttgccggt
gttaaggtgttgaagctttggatgaacgaggaaaatgaggtcgaaaaagtaaccgtggat
atgggtatgcctgttctggatgcttcgtccatccctgctgctttcaagcagtctcctgta
ataaaatgccttttgccggtaagcgacgatactacctatgaggtgacaagtgtctccatg
ggaaatccgcatgccgtgctttttatggataagatagatgagcttgatttgccagaaatt
ggaccggttgtcgagcattcaccctatttccctaatcgtaccaataccgaatttgtggag
gtggtttcggatcgttggttgaaaatgcgtgtttgggagcgcggtgccggtgagacgctg
gcttgcggtaccggggcttgtgctgcggtggttgcgggcgtccttaatggtttggtgggc
cggtctgcaaccgtacaattgcggggcggtgatctggagatcgagtggagtgaggacgac
aaccgcgtttaccttacgggtgatgctgtgactgtgtttgaaggagaaataaaattagat
gagtga
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