KEGG   Petrimonas sp. IBARAKI: PEIBARAKI_6374
Entry
PEIBARAKI_6374    CDS       T05132                                 
Name
(GenBank) Type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pet  Petrimonas sp. IBARAKI
Brite
KEGG Orthology (KO) [BR:pet00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pet02048]
    PEIBARAKI_6374
Enzymes [BR:pet01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PEIBARAKI_6374
Prokaryotic defense system [BR:pet02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PEIBARAKI_6374
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DEAD
Other DBs
NCBI-ProteinID: BBD46381
UniProt: A0A3G9DRM8
LinkDB
Position
2920072..2923221
AA seq 1049 aa
MSDIGKIERETQNRLVKLFQNELGYKYLGIWEKREGNSNVEADILKDWLLNKRKISAGLA
DKAIFEVEKFSNDQSNLYDVNKTFYSLLRYGVNVQAAIGQNKQTVWLIDWENPEKNDFSI
AEEVTIDSKYYKKRPDIVLYINGIAIGVLELKRSTVSISEGIRQNLDNQKHIFIKPFFNT
IQFVLAGNDVQGLEYGTIGTKEKYFLKWKEVNEEKDKAYPHLLEITKSIREKSEKYSYPL
DKSIIEMFNKERFVELLRDFVVFDRGIKKLCRPNQYFGIKSAQDFIIRREGGIIWHTQGS
GKSLTMVWLTKWIRKHNPNARVLIITDREELDEQIEKVYKGVDEEIYRTKSGRDLLEKLN
NTSPWLLCSLIHKFGGKEEVDEKDVENYLTDLKKSIPSDYSAKGDIYVFVDECHRTQSGK
LHDAMKVFVPDALFIGFTGTPLLKTDKQTSLEIFGRYIHTYKFDEAVQDKVILDLRYEAR
DVKQNITSHDNIDQWFELKTEGLTDFKKTELKQKWGTLKKVFSSKSRLEKIVMDILMDMA
RKERLQNGHGNAILVSDSIYNACRYFELFQQSGFKQCAIITSFVPNHNDIKGEESGEGYT
EKLKRFEIYQKMLSDYFNEPSDKALTKIDVFEKEVKKKFVEEPAQMKLLIVVNKLLTGFD
APPATYLYIDKNLQNHGLFQAVCRVNRLDGDDKDYGYVIDYMDLFKSLEQAFHDYTSEAL
SGYEKSDIEGLLKDRLKSGKERLDEALEAIKALIEPVEPPKNTIDFIHYFCGKDTGNKEE
LKETEPRRVSLYRLTISLIRAYSNIVDELSKAGYSDKEIEQIRADVKYFENVREIVQLAS
GDYVDLKQYEPAMRYLIDSYIDAESSKVLANFDDFSLIDLLVERGESALEVLPEEIKSSN
EAMAEAIENNLRKVIIEQSPTNPMYYEKMSVLLDEIIKLRNSETLDYQKYLQRIIALSTQ
VKKPETTTYPFAINTNAKRALFDNLDKNEDLAVALDEKVRRTKKPGFRQHKQKSRAVRIS
IQEVLAKFGITDEEEIHRIFDLVKNQEEY
NT seq 3150 nt   +upstreamnt  +downstreamnt
atgagcgacatcggaaaaatagaacgagaaacccaaaatagattggttaaactgtttcaa
aatgagcttggatacaaatacttaggaatttgggaaaaacgtgaaggaaacagcaatgtt
gaagctgatattctgaaagattggttgctgaacaaaagaaaaatatcagcgggtttagct
gataaagctatttttgaggttgaaaaattttccaacgaccaaagtaatctgtatgatgta
aataaaacgttttactcattacttcggtatggcgtaaatgttcaagcagctattggtcag
aacaaacaaacagtttggcttattgactgggaaaatcccgagaaaaacgacttttccatt
gccgaagaagttaccattgatagcaaatattacaagaaacgtccggatattgttctttat
atcaatggaattgctattggtgttttagagctgaagcgaagcacagtttcgatttccgaa
ggaattcgccaaaatttagacaatcaaaaacatatattcataaagccctttttcaatact
attcagtttgttcttgccggaaacgatgtacaaggtttggagtacgggactatcggaacc
aaagaaaagtacttcttgaaatggaaagaggtaaacgaagaaaaagataaagcctaccca
catctattagaaatcacaaaatcaatcagagaaaaatcagaaaagtatagctatccatta
gataaaagtatcatagaaatgtttaacaaagaacgtttcgttgagctgttgcgtgatttt
gtggttttcgatagaggaataaaaaaactttgtcgtcccaatcagtatttcggaataaaa
tcggcacaggattttatcatccgacgtgagggaggcattatttggcatacgcaagggagt
ggtaaaagtttaaccatggtttggcttaccaaatggattagaaaacacaatccgaatgca
cgagtgctaatcatcacagaccgtgaggaattagacgagcagattgaaaaagtttacaaa
ggtgttgatgaagagatttatcgtacgaaaagcggaagagacttattggaaaaactaaac
aacacttcgccttggttgctttgttcgctaatccacaagtttggcggaaaagaggaagtg
gacgagaaagatgtggaaaactacttgacagacctaaaaaagagtatcccgtcagattat
agcgcgaaaggcgatatttacgtttttgtagatgaatgccaccgcacacaatcgggaaaa
ctgcatgatgctatgaaggttttcgttcctgatgcattgtttataggttttaccggcacg
ccactattgaaaaccgacaagcagacaagtttggagatttttggtcgatatattcatacc
tataaatttgatgaagccgtacaggataaagttatcttggatttacgctatgaagcacgt
gacgtaaaacaaaacattacttcgcacgacaacatagaccaatggtttgaactgaaaaca
gaaggactaaccgactttaagaaaactgagctgaaacaaaaatgggggacacttaaaaaa
gtgtttagcagtaaatcgcgattagaaaaaattgtgatggacattttgatggacatggct
cgcaaagagcgtttgcaaaacggtcatggcaacgctatactcgtttccgacagtatttac
aacgcttgcaggtattttgaattattccaacaatctggttttaaacaatgcgccattatt
acttcttttgtacccaatcataacgatataaaaggagaggaatctggtgaagggtacacc
gaaaaattaaagcgttttgaaatttatcagaagatgctttctgattattttaacgaaccg
tcagataaagcattgacaaaaattgatgtttttgaaaaggaggtaaaaaagaagtttgta
gaagaacctgctcaaatgaaattactcattgttgtaaacaaactacttaccggatttgat
gctcctccggcaacttatctttacattgacaaaaacctgcaaaatcacggcttgtttcaa
gctgtttgccgagtaaatcgtcttgatggcgatgataaggattatggctatgttatcgac
tatatggacttgttcaaaagcttagaacaagcatttcacgattatacatcggaagcttta
tcgggatacgagaaatcggacattgaaggcttgctaaaagatcgactaaaatcaggaaaa
gaaagattagacgaagctttagaagctataaaagcactcatagaaccggttgaaccgcct
aaaaacaccattgattttatccattacttttgtggcaaagacacaggaaacaaagaagaa
ctgaaagaaacagagcctcgcagagtgtcgttatacaggctgactatctcactaataaga
gcatacagcaacattgtcgacgagttaagtaaagcgggttattccgacaaggaaatagag
caaattagggcagacgtaaaatattttgaaaatgttcgtgagattgttcagttggctagt
ggcgactatgttgacttaaagcaatatgaacctgccatgaggtatttaatagatagctat
attgatgcagaaagcagtaaagtacttgccaattttgatgattttagcttaattgatttg
ttagtagaacgaggagaaagtgcattggaggttttgcccgaagagattaaatctagtaac
gaagctatggcagaagctattgaaaacaacttacgtaaggtaatcattgagcaaagtcct
accaatccgatgtactatgagaaaatgagcgttttgttggatgagataattaagttaaga
aactcggaaacattagattatcaaaaatatttacaaagaataatagcgttatctacccaa
gttaaaaaaccagagacaactacctatccttttgccattaacacaaatgctaaaagagcg
ttattcgacaacttagataaaaatgaagacttggcagtagctttagatgaaaaagttcgc
agaacgaaaaagccaggctttaggcaacataagcaaaaatcaagggcagttcgaataagc
attcaagaggttttggctaaattcggcataactgacgaagaagaaatacatcgcattttt
gatttagttaaaaaccaagaggaatactaa

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