Petrimonas sp. IBARAKI: PEIBARAKI_6701
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Entry
PEIBARAKI_6701 CDS
T05132
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pet
Petrimonas sp. IBARAKI
Brite
KEGG Orthology (KO) [BR:
pet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PEIBARAKI_6701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pet03019
]
PEIBARAKI_6701
03009 Ribosome biogenesis [BR:
pet03009
]
PEIBARAKI_6701
03036 Chromosome and associated proteins [BR:
pet03036
]
PEIBARAKI_6701
Enzymes [BR:
pet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PEIBARAKI_6701
Messenger RNA biogenesis [BR:
pet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PEIBARAKI_6701
Ribosome biogenesis [BR:
pet03009
]
Eukaryotic type
90S particles
RNase
PEIBARAKI_6701
Prokaryotic type
rRNA processing factors
PEIBARAKI_6701
Chromosome and associated proteins [BR:
pet03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PEIBARAKI_6701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BBD46708
LinkDB
All DBs
Position
complement(3320712..3321518)
Genome browser
AA seq
268 aa
AA seq
DB search
MRKVRAIPHKGKEPYFSFYRMLGFYPDRIDLYQEALTHRSSSIRSNSGKWVNNERLEFLG
DAILDAIVADILYKKFENKKEGFLTSTRSRIVQRETLNKIAIEIGIDKIITSSTRNLAHN
TNIYGDALEALIGAIYLDQGYRVAKSFVFETLIKQHINIDTVLKSEVDFKSRLIEWGQKY
KIDVGFEVTDSSYDEQNNPIFESRVIVGGMDLGSGKGYSKKESHQKAAKKAIKKLRNDNE
LLEKLFEKGNSESSETSGQEEENVQIEI
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagtaagggcaattcctcacaaaggaaaagaaccctacttttcattttacagg
atgttgggattttatcccgatagaattgatctgtaccaggaagcattgacacacagatca
tcatcaattcgctcaaattcaggaaaatgggttaataatgaacggctcgaatttctgggt
gatgccattcttgatgccattgtagccgatattttgtacaaaaaattcgagaataaaaaa
gagggattccttaccagtacccgctcgaggattgttcaacgtgaaacgctgaacaaaatt
gctattgaaatagggatcgataaaatcatcacttcatccacccggaatcttgctcacaac
accaatatctacggagatgccctcgaagcactgattggagcgatctatcttgatcagggt
taccgcgtagcgaaaagttttgtttttgaaacgctcattaagcaacacatcaatatcgat
accgtattgaaaagtgaggtagactttaagtcgcgtctgatagagtggggacaaaaatac
aaaattgacgtagggtttgaggtgaccgactcttcctacgatgagcaaaacaatcctatt
tttgaatcgagggttattgtcggtgggatggatctgggttcaggaaaagggtattccaaa
aaagaatcgcatcagaaggcagcaaagaaagccatcaagaagctgcggaacgataatgaa
cttctggaaaaacttttcgagaaagggaatagtgagtcttcagaaacttccgggcaggag
gaagagaacgtgcagatagaaatctaa
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