Petroclostridium sp. X23: QKW49_01225
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Entry
QKW49_01225 CDS
T09049
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
petr
Petroclostridium sp. X23
Pathway
petr02024
Quorum sensing
petr03060
Protein export
petr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
QKW49_01225 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
QKW49_01225 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QKW49_01225 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
petr02044
]
QKW49_01225 (ffh)
Enzymes [BR:
petr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
QKW49_01225 (ffh)
Secretion system [BR:
petr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
QKW49_01225 (ffh)
Eukaryotic Sec-SRP protein
QKW49_01225 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_17
AAA_22
CbiA
AAA_30
Zeta_toxin
APS_kinase
MMR_HSR1
AAA_31
cobW
ABC_tran
AAA_16
AAA_33
AAA_18
Peptidase_S66C
nSTAND3
NPHP3_N
Thymidylate_kin
ATP_bind_1
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WHH59421
LinkDB
All DBs
Position
260729..262066
Genome browser
AA seq
445 aa
AA seq
DB search
MAFESLASKLQETFKKLKGKGKLTEKDVKDSMREVKLALLEADVNFKVVKDFVNKVAERA
VGSEVLESLTPGQHVIKIVNDELTALMGSAQSKIVFSPKPPTVLMLVGLQGAGKTTTCGK
LAGVLRKQGKRPLLVAGDIYRAAAIKQLQVVGGQLDIPVFSMGDKNSPVDIAKAAIQHAN
SHGNDLVLIDTAGRLHINEELMDELKDIKQAVRPTEILLVVDAMTGQDAVNVAESFNAQL
GVDGIILTKFDGDTRGGAALSVRAVTGKPIKFIGMGEKLSDLEPFYPDRIASRILGMGDI
LSLIDKAQEAFDQKKALEMEKKLRTQQFTFDDFLSQLEQMKNMGPLDQILGMMPGMNNKM
LKNIEVDEKQLDHVEAIIKSMTKKERENPSIINSSRKKRIAGGSGTKIQDVNNLLKQFEQ
MQKLMKQFGDPKKLKKGKMKFPFMG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgaaagtttggcgtcgaagctgcaggagacgttcaaaaagttaaaaggcaaa
gggaagttaactgaaaaagacgtaaaagattcaatgcgtgaagtgaagcttgcgctgctt
gaagctgatgtaaactttaaagtcgttaaagattttgtaaataaagtagctgaaagagcc
gtaggttcggaagtgcttgagagcctcacgccgggtcagcatgtcataaaaatcgtaaat
gatgaacttaccgcgttgatgggtagtgcgcaaagcaagattgtattttcgccaaagcct
cccaccgtgctaatgcttgtgggacttcaaggggcaggtaagacgactacctgcggaaag
ctcgccggggtattgagaaagcaagggaagagacctttattggtagccggagatatatac
agggcagctgctattaaacagctgcaggttgtgggcggtcagttggacatacccgtattt
tccatgggagataagaatagtcctgtagatatagcaaaagcagcgatacagcatgcgaat
tctcacggcaatgatcttgttcttattgacactgccggccggctccatatcaatgaagag
ttaatggatgaattaaaagatatcaagcaagcggttagacccacagaaattcttcttgtg
gtggacgcgatgaccggacaagatgcggtgaatgttgcagaaagctttaatgcccaatta
ggggtagatggtattatacttaccaagtttgatggggatacaagaggtggagctgcgcta
tcggttcgtgcggtaaccggaaagcctataaagtttattggaatgggtgaaaagttaagc
gatcttgagccgttctatcctgatagaatcgcttccagaatccttggaatgggagatatt
ctaagtctgattgacaaagcccaagaagcttttgaccagaaaaaagcgcttgagatggag
aaaaagctgcgtacacagcagtttacctttgacgactttttaagtcagttggagcaaatg
aagaacatggggccgctggaccagatactgggtatgatgccggggatgaataataaaatg
cttaagaacattgaagttgatgagaaacaactggaccatgttgaagcaatcataaaatcc
atgaccaaaaaggaaagggagaacccatccattatcaactcaagccgtaaaaagaggatt
gccggaggcagtggtaccaagatacaggatgttaataatttattaaagcagtttgaacag
atgcagaagttaatgaagcagttcggtgaccctaagaaactgaaaaaaggcaagatgaaa
tttccgtttatgggttaa
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