Petroclostridium sp. X23: QKW49_02140
Help
Entry
QKW49_02140 CDS
T09049
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
petr
Petroclostridium sp. X23
Pathway
petr00260
Glycine, serine and threonine metabolism
petr00460
Cyanoamino acid metabolism
petr00630
Glyoxylate and dicarboxylate metabolism
petr00670
One carbon pool by folate
petr00680
Methane metabolism
petr01100
Metabolic pathways
petr01110
Biosynthesis of secondary metabolites
petr01120
Microbial metabolism in diverse environments
petr01200
Carbon metabolism
petr01230
Biosynthesis of amino acids
petr01240
Biosynthesis of cofactors
petr04981
Folate transport and metabolism
Module
petr_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
QKW49_02140 (glyA)
09102 Energy metabolism
00680 Methane metabolism
QKW49_02140 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
QKW49_02140 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
QKW49_02140 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
QKW49_02140 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
QKW49_02140 (glyA)
Enzymes [BR:
petr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
QKW49_02140 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Met_gamma_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WHH59583
LinkDB
All DBs
Position
complement(447438..448673)
Genome browser
AA seq
411 aa
AA seq
DB search
MFSTQEVKKIDQEVAEAIELEIARQRNKIELIASENFVSPAVMEAMGTPLTNKYAEGYPG
RRYYGGCECVDIVENLAIERAKQIFGADHANVQPHSGAQANTAVYFAVLKPGDTILGMNL
AHGGHLTHGSPVNISGSYFNIVPYGVREDNQMIDYDEVRRLAKENKPKIIVAGASAYPRT
IDFAAFKEIADEVGAYFMVDMAHIAGLVAAGLHPNPVPYADFVTTTTHKTLRGPRGGMIL
CKEEFAKAIDKAIFPGIQGGPLMHVIAAKAVSFKEALSDGFKDYQKQIVKNAAALAKALM
AEGLNLVSGGTDNHLILIDLRNMDVTGKVLEKMLDEVGITVNKNAIPFDPQSPFITSGIR
VGTPAVTTRGMKEEDMAEIAKLIKMTISEFDTKKEEIEAGVKALCEKYPLY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtacacaagaagtaaaaaaaattgatcaggaagtagcagaagccattgaattg
gaaattgcgagacaaagaaataaaatcgagttgattgcttccgaaaattttgttagtccg
gcagtgatggaagcaatgggaactccgttaacaaataaatatgctgaaggatatcccggc
agaagatattatggcggatgcgaatgtgtagatattgtggaaaatttggcgatagaaaga
gcgaagcagatttttggagctgaccatgccaatgtgcagccacattcaggtgcgcaagcg
aatacggcagtttattttgcggtattaaagcccggcgacactatacttgggatgaatctc
gcccatggggggcatttaacccatggaagtcctgtgaatatttcaggatcatatttcaac
atcgttccttacggtgttagagaagataatcagatgattgactatgatgaagtaagaaga
ttggccaaagaaaataaacctaaaattattgttgccggtgcgagtgcatatccgagaacc
attgattttgcagcttttaaagaaattgcagatgaagtgggtgcatattttatggtagat
atggcgcatattgccggcttagtggctgcaggtctgcacccgaatcctgttccatacgcc
gattttgtaacgactactacgcacaagacattaagaggtcctagaggcggtatgattctt
tgtaaggaagaatttgcgaaagccatcgataaagcgatattcccaggtattcagggcggc
ccgctgatgcatgtcattgcggcaaaggctgtaagctttaaggaagcattaagcgacggg
tttaaagactatcaaaaacaaattgtcaaaaatgcagctgctttggctaaagcgctcatg
gcagagggattaaacttggtttcgggtggaacagacaatcatctgatcctcatagattta
agaaatatggatgttacaggtaaagtgttagaaaagatgttggatgaagtaggtattacc
gttaataaaaatgcaataccttttgatcctcaaagtccgtttattaccagtggtatcaga
gtaggtacacctgctgttacaacaagaggaatgaaggaagaagatatggcggaaatagcg
aagctgattaagatgacgatttctgaattcgatacaaagaaggaagaaattgaagccggc
gtaaaagctttgtgtgaaaagtatccgctttattaa
DBGET
integrated database retrieval system