Petroclostridium sp. X23: QKW49_03900
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Entry
QKW49_03900 CDS
T09049
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
petr
Petroclostridium sp. X23
Pathway
petr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QKW49_03900 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
petr03400
]
QKW49_03900 (priA)
Enzymes [BR:
petr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QKW49_03900 (priA)
DNA repair and recombination proteins [BR:
petr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
QKW49_03900 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Trm112p
PIF1
TrwB_AAD_bind
Zn_ribbon_6
5-nucleotidase
Zn_ribbon_PF0610
Motif
Other DBs
NCBI-ProteinID:
WHH59901
LinkDB
All DBs
Position
complement(785651..788137)
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AA seq
828 aa
AA seq
DB search
MAEKNIAEVIINNTSRSVDKIFHYLIPPKKANDIKVGVRVIVPFGQGNKKTEAYVVNIVE
KSSFAQLKEIGTVIDSMPLFDQKMVYLIYWLKEKYFCTYYEAVKALLPPGIGLKFQEWIK
INHALSNDVIQKRISGSAMQKTIIETIMKHDGVVEYSELAILMHSNNLRSSIKSLLKKEL
VHIVHDYAAMVKDKKIKVAYLAADHEEMEYQLEKIKAKAPVQARILEILMENEFVSLADL
VLFSNGSYSAVNTLYKKGLIEYRDHIIERNPVDETIIKRTSAFKPTQEQENVIKCIQQKF
DENVPVSFMLRGITGSGKTEVYLQVIDYVISKGKQAIVLVPEIALTPQMVERFIGRFGSR
VAVFHSGLSMGERYDQWKKIRSSQVDVVVGARSAIFAPFDNLGIIILDEEHENSYKSELS
PRYHAREVAEKRSRMENAVVVYSSATPSLESYYRAQTGKYTLLEMTKRYNNVSLPAVDII
DMREELTNGNKSIFSSKLKEEIQRNLENGQQTILFLNRRGFSTFISCRSCGFVLACPHCN
ISLTYHASNNKLVCHYCGFVAKNVCSCPECKSSYIRHFGIGTQKVEQEIKLLFPSASVIR
MDVDTTRTKFAHERILNTFRDQNIDILIGTQMVSKGLDFPSVTLVGVLAADMSLNIDDYR
SAERTFQLITQVCGRSGRGDMKGRAVIQTYQPEDSTIQMAKTHDYEAFYNNEIKIRKQLS
YPPFSQIISILVSGMDENAVKRRIGQIAVELKEKIKGSHCSAAWGELLGPMPAPISRIKN
KHRWRILLKCEDSENIGGILANMLSEHYNDRNNIGVSLIIDINPVNMY
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaaaatattgcagaagtgataattaataatacatccagaagtgtagacaaa
atattccattatttgattccccctaaaaaagccaatgatataaaagtgggagtgagggtc
attgtgccctttggtcaaggaaacaagaaaacagaagcctatgtcgtcaacattgtagaa
aagagcagcttcgcccaactaaaggaaattggtactgtgattgacagtatgcccttattt
gatcaaaagatggtatatcttatttactggcttaaagaaaaatatttttgtacttattat
gaagcagtaaaggcgttactgcctcccggaataggacttaaatttcaagaatggattaaa
ataaatcatgctttgagtaatgacgttatccaaaaaagaataagcggatcggcaatgcaa
aaaacaattatagaaaccatcatgaagcatgatggagttgtagaatattcagagctggct
attttaatgcatagcaacaatttgcgttcatctataaaatcacttttaaaaaaagaattg
gtgcatattgttcatgattacgctgctatggtgaaggataaaaaaattaaagtagcgtac
ttggctgctgatcatgaagaaatggaataccagttggaaaagataaaagcaaaagcgccg
gtacaagcgagaattctagagatcctcatggaaaatgagttcgtttcacttgcggacttg
gtattgttttctaacggttcctacagtgctgtgaatactctttataagaaaggactcatt
gagtatagagaccatatcatagaacgtaatccggtagatgaaacaattattaaaagaacc
agtgcatttaaacctactcaagaacaagaaaatgtgataaaatgtattcaacaaaaattt
gatgagaatgtaccggtatcgtttatgcttcggggtataacaggcagcggaaagacggaa
gtatatcttcaggtaatcgattatgtaatatcaaaagggaaacaagcgattgtacttgta
cctgagattgcgttgacgccccagatggtggagcgttttatcggaagattcggttccagg
gttgccgtttttcacagcggactctccatgggagaaagatatgatcaatggaaaaaaata
agaagttcgcaggttgatgtggtggtaggagctagatcagccatttttgctccctttgac
aatcttggcatcatcatccttgatgaagagcatgagaactcatacaagtcagagttatca
cctcgttatcatgccagggaagttgcagagaaaagaagccgtatggaaaatgcggtcgta
gtatatagctcggcaacaccgtcactggaaagttattatagggcgcaaacgggtaaatat
acactgttagaaatgacaaaacggtataataatgtttcattacctgcggtagatatcata
gatatgagagaggaactgacgaatgggaataagtcgatattcagttccaagttaaaggaa
gaaatacaacggaatttagagaatgggcagcagacaatcctttttttaaaccgcagaggt
ttttcgacgtttatatcatgcagaagctgcggatttgttttggcttgtcctcactgcaat
atatcgctgacctatcatgcgtctaataataagctggtttgccattactgcggatttgtt
gcgaaaaacgtttgcagctgtcctgagtgcaagagtagttatatccggcattttggtata
gggacccagaaagtggaacaggaaattaaattactttttccatcggcatcggtcatcaga
atggatgtggatacgacacgtacgaagtttgcccatgagagaatattaaatacttttaga
gatcaaaatatagatattcttataggtactcagatggtatcaaaaggattggattttccg
agtgttacccttgtcggggtattagcggcggatatgtcgctaaatattgatgattatcgt
tcggctgaaagaacctttcagttgattactcaggtgtgcgggaggtccggcaggggtgat
atgaaagggagagcggttatacagacctatcaaccggaagattcaaccatacagatggca
aaaacacatgattatgaagctttttataataatgaaatcaaaatcagaaaacagttaagc
tatccgccattcagccaaatcatatccatccttgtaagcggtatggatgaaaatgctgtt
aaaagaaggattgggcagattgctgtagagttgaaggaaaaaataaaaggcagccattgc
agtgcagcatggggtgaactattggggcctatgccggcgcccatctccagaatcaaaaat
aaacaccgatggaggatattactcaaatgtgaggatagtgaaaacattggaggaatactt
gccaatatgctaagtgagcattataatgataggaataatattggagttagcttgatcata
gatattaatccggtaaatatgtattag
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