Petroclostridium sp. X23: QKW49_04070
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Entry
QKW49_04070 CDS
T09049
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
petr
Petroclostridium sp. X23
Pathway
petr03030
DNA replication
petr03410
Base excision repair
petr03420
Nucleotide excision repair
petr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QKW49_04070 (polA)
03410 Base excision repair
QKW49_04070 (polA)
03420 Nucleotide excision repair
QKW49_04070 (polA)
03440 Homologous recombination
QKW49_04070 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
petr03032
]
QKW49_04070 (polA)
03400 DNA repair and recombination proteins [BR:
petr03400
]
QKW49_04070 (polA)
Enzymes [BR:
petr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QKW49_04070 (polA)
DNA replication proteins [BR:
petr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QKW49_04070 (polA)
DNA repair and recombination proteins [BR:
petr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QKW49_04070 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QKW49_04070 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
XPG_I
ORC6_2nd
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WHH59935
LinkDB
All DBs
Position
complement(822291..824975)
Genome browser
AA seq
894 aa
AA seq
DB search
MNNKKLMIVDGNSIINRAFYGIHLLSNSEGLYTNAIYGFLNIIFKYIEEEKPEYICVAFD
MKAPTFRHKEFEQYKAHRKGMPDELAVQLPVLKQVLEAMNIEMFQKEGYEADDIIGTISN
LCEHNDIECVIVTGDKDSLQLATDKTRIKLPVTRKGVTETEDYDADKVIEKYGVTPHQFI
DVKGLMGDPSDNIPGVAGVGEKTALSLIRTYKSVDGIYEHIDDVKVRKNVKESLVDNKEM
AYLSKKLATIDRNIPIDFDFSNCTVEAYDKGKLLELFRRLEFKSFIQKFELEASEDVVSS
GQGDYRHVTHIDELKEIVNEVLKKQELSYLLYSNVAKGNDEVLGVAIALQQDTAIYIDVN
ENLTGQDIIAVLKPVFEDDDIKKSSHNIKEDIVWLHQYGVDVKGIGFDTMIAAYIMNPSR
SSYQIDEIAQEFLGLHIPSEETVLGKGKSKVSISDIDSETAVSYACQQVLAIPQLMEVLN
DRIKEYNQIELYYDVELPLVEVLAFMQIEGFKVDKEKLIQFSAMLDEKITQLTQEIYQLA
GEEFNINSTKQLGVILFEKLDLPVVKKTKTGYSTDVEVLEKLAGKHRIIDLLSEYRQLVK
LKSTYADGLLNVINEKTGKIHSSLNQTVTATGRISSTEPNLQNIPIRLEQGREVRKMFVV
SNDEYVLMDADYSQIELRVLAHISEDPNMIDAFRNNEDIHRRTASQVFGVPMEEVTSVMR
SRAKAVNFGIVYGIGDFSLSQDLRITRKEAKKYIDSYLEKYGMVKKYMTDTVELAKNQGY
VTTMLNRRRYVPELQAKNFNMRSFGERVAMNTPIQGSAADIIKIAMVNVYKELMERKLKS
KLILQVHDELIIETHKDEIQEVTEILKTKMENAVEMKVPLVVDLNIGTSWFDTK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgaataataagaaactaatgatagtcgatggaaatagtattatcaatagagctttttat
gggatacaccttttatccaattcagaagggttatatactaatgctatatatggattttta
aatattatttttaaatatattgaagaagagaagccggaatacatatgtgtggcttttgat
atgaaagcacctacattcaggcataaagaatttgaacagtataaggcgcatagaaaagga
atgcctgacgaactggctgttcagcttccggtgctgaagcaggtattagaagccatgaat
attgaaatgtttcagaaggaaggctatgaggcggatgatattattggtacgatttcaaat
ctttgcgagcataatgatatagaatgtgtgattgtaacaggggataaagactcattgcag
cttgcgaccgacaagacgaggattaagctgcctgtcaccagaaaaggtgtgaccgaaaca
gaggattatgatgcggacaaagtcattgaaaaatatggagtgactccgcatcaatttatt
gatgtaaagggacttatgggtgacccgtcggataatattccgggtgtcgcgggggttgga
gaaaaaaccgcattatccctgatccggacatataaaagtgtagatggtatctatgaacat
atcgatgatgtgaaagtcaggaaaaatgtaaaggaaagtctggtagataataaagaaatg
gcgtatttaagtaagaagcttgcgaccattgatagaaatattcctattgattttgatttc
tccaattgtactgtagaggcttacgataagggaaaactgctggaattgtttcgaaggctc
gagtttaaaagttttattcaaaagtttgaactggaagcatcggaagatgttgtcagttca
ggccaaggtgattataggcatgtgacccatatagatgaattaaaagaaatagtgaatgag
gttttaaaaaaacaggagctttcctacctattatacagcaatgttgccaaagggaatgat
gaggttctaggggtggcaatagcattacaacaggatactgcgatttatatagatgtaaat
gaaaacctgaccggacaagatattattgccgtgctcaagccggtattcgaagatgatgat
ataaagaaaagcagccacaacattaaggaagatattgtatggctgcatcagtacggtgtt
gacgtaaaaggtattggatttgataccatgattgctgcatatattatgaatccatccaga
agctcttatcagattgatgaaatcgcgcaggagtttttaggacttcatattccttcagaa
gaaaccgtactgggaaagggtaaatctaaagtatccatatccgatattgattcagagacg
gctgtatcctatgcctgtcagcaagtgctggcgatacctcaattaatggaggtattaaat
gacaggatcaaagaatataatcaaatagagctgtattatgatgtggagctgccattggta
gaagtgcttgcattcatgcagattgaaggatttaaagtcgataaggaaaagctgatacaa
ttttctgcaatgctggatgaaaagattactcagttgactcaagaaatctatcagttggca
ggagaagaatttaatatcaattctactaaacaattaggcgttattctattcgaaaaactt
gatttaccggtggtgaaaaagactaagaccggatattcgacagatgtggaagttttagag
aagctggctgggaaacatcgtattattgacttgttgtccgaataccggcagttggtgaaa
ttaaaatcgacttatgccgatggtttattaaatgtaatcaacgaaaagacaggaaagata
cattccagcttaaatcagacggttaccgctacaggaagaataagcagcacggaacctaat
ctgcagaacatccccattagactcgaacaaggaagagaagttcgaaaaatgtttgttgta
tcaaatgatgaatatgtcttaatggatgcggattacagccagattgaattacgggtgttg
gcgcatatttctgaggaccctaatatgattgatgcattcagaaataacgaggatattcat
agaaggactgcatcccaggtgttcggcgttcctatggaggaagtaacctctgtaatgcgt
tcaagagcgaaggccgtaaacttcgggattgtttatggaataggtgattttagtctttcg
caggatttgcgaatcacccggaaagaggctaagaagtatattgatagttaccttgaaaag
tacggcatggttaaaaagtatatgacggatacggtggagcttgcaaaaaatcaaggatat
gtaacgactatgttaaatagaagaagatacgtacctgagcttcaggcaaaaaatttcaac
atgcgttcttttggcgaaagggttgcaatgaatacgcctatacagggaagcgcggcggat
atcataaaaatcgcgatggtaaatgtatataaagaacttatggaaagaaaattgaaatca
aaattgatccttcaggtccatgatgaactgattattgaaacacacaaggatgaaattcaa
gaggttaccgaaatattaaagacgaaaatggaaaatgccgtagagatgaaagtaccgctg
gttgtggatttaaatatcggaaccagctggtttgatacgaaatga
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