Petroclostridium sp. X23: QKW49_07055
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Entry
QKW49_07055 CDS
T09049
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
petr
Petroclostridium sp. X23
Pathway
petr03030
DNA replication
petr03430
Mismatch repair
petr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QKW49_07055
03430 Mismatch repair
QKW49_07055
03440 Homologous recombination
QKW49_07055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
petr03032
]
QKW49_07055
03400 DNA repair and recombination proteins [BR:
petr03400
]
QKW49_07055
Enzymes [BR:
petr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QKW49_07055
DNA replication proteins [BR:
petr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QKW49_07055
DNA repair and recombination proteins [BR:
petr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QKW49_07055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
DUF679
ThuA
Motif
Other DBs
NCBI-ProteinID:
WHH60470
LinkDB
All DBs
Position
complement(1434805..1438299)
Genome browser
AA seq
1164 aa
AA seq
DB search
MKAFTHLHVHTQYSLLDGACRIKDLICRAKELGMHSIAITDHGVMYGVVEFYKEAKKNGI
KPIIGCEVYTASRSRHDKVNELDGSQGHLVLLAKNMVGYQNLMKIVSTAYVEGFYYKPRV
DFEVLEAHNNGIIALSACLAGDIPKALLNGNYDRARQLAEKYSSVFGKDSFYLELQDHGI
EEQRRVNQQLIKLSKETGIDMVATNDIHYVNKEDAKNQDVLICIQTGKTVDDEQRLKFQT
SEFYLKTADEMAALFPNALEAIENTQRIVEQCNVDFEFGQLHLPSYEVPKEYSSYEYLAT
LCKEGLHKRYKLITQELEDNLEYELQVIRSMGYVDYFLIVWDFTKYARDHGIMVGPGRGS
AAGSLVAYCLGITNIDPIKYNLLFERFLNPERISMPDIDIDFCYERRQEVIDYVVSKYGE
DRVAQIITFGTMAARAAIRDVGRALNISYADVDIIAKQIPFELGMTINRALEVNSDLKKM
YDSDEQGRQLIDTAIALEGLPRHASTHAAGVVISKEPISTYVPLQKNDESITTQFPMGTL
EELGLLKMDFLGLRTLTVIRDALSMIRQSRGLDIDINSISFEDKEVFELLCQGNTEGVFQ
LESAGMKQFMKELQPLSLEDIIAGISLYRPGPMDQIPRYVRNKNNPELIAYKHLLLESIL
DVTYGCIVYQEQVMQIVRELGGYSLGRADLVRRAMSKKKTDVMEQEKNNFIYGIVDTNGE
VIVPGAIRNGVDEQTAKEIFDEMMDFAKYAFNKSHAAAYAVIAYQTAWLKCFYPTEFMAA
LLTSVLDNSTKVSQYIHECKKMGIKLLPPDINESSDTFTVSENSIRFGMAAVKNVGRNFV
IAVTQERNNAGLFKSFRDFCERMSEKGINKRLVESLIKCGAFDSFKVYRSQLMATYERIL
DGIAQSKKKNIEGQISLFGNDDQQEQTFAVHDELPQMNEYPTKVLLSMEKEIMGLYLSGH
PLDQYQSQLNQVVTASTADLHMIQENLGETSAHKGQRILGDGTEVILGGIISAKKTKTTK
SNNLMAFVTLEDSFGSVEVIIFPKILDKYSNYIIEDNVVTIKGRISVREEEQPKILCEEI
VPFKKIENLKKLYIKIDGESSHVLEELSPVLQFFNGDTPVYVYFEKDKKVSLASRDLWVK
LSDLLLDELRNIVGDDSVRVVDCS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttttacacatttacatgttcatacacaatatagtttgttagatggcgcatgt
cggattaaagacttgatatgcagagccaaggaattaggaatgcatagtattgccatcact
gaccatggtgtaatgtatggggttgtggaattctataaggaagcaaagaaaaacgggatc
aaacctatcattggctgcgaggtgtatacagcttcaaggtcccgacatgataaagtaaat
gagttggatggcagtcaaggtcatttggtgttgttggctaaaaatatggttggatatcag
aatcttatgaagattgtttctactgcttatgttgaaggtttttattataagccaagagta
gattttgaagtgctggaggcgcataataacggaatcattgcactgagtgcatgtcttgcc
ggggatatcccaaaggctttattgaatggtaattatgacagggcacggcagttggccgaa
aaatattcctctgttttcgggaaagacagtttctatcttgaactgcaggatcacggaatt
gaagaacagcgcagggtaaatcagcagcttatcaagctttcaaaagaaacaggcattgat
atggttgcaaccaatgatatccattatgtcaacaaagaagatgcgaaaaatcaggatgtt
ttaatatgtattcaaacaggaaaaactgttgatgatgaacaaagactgaaatttcaaacg
tcagagttttatctaaaaacagccgatgaaatggctgcgctctttcctaatgccttagaa
gccattgaaaatacccagcgtattgttgagcaatgtaatgtggacttcgaatttggtcaa
ttgcatttaccttcatacgaagtaccaaaagaatatagttcatatgaatatttagcaacg
ctgtgtaaagaaggattgcataagagatataagctaataacgcaagagttggaagataac
ttggagtatgagcttcaagtcatccgcagcatgggatatgttgattattttctgattgta
tgggattttactaaatatgcgcgggatcatggtattatggtaggtcccgggagaggatcg
gcagcaggaagcttggtagcatattgcttgggcattaccaatattgatcccataaaatat
aatttactgtttgaaagattccttaatccggagagaataagtatgccggatatagatatt
gatttttgctacgaacgaaggcaggaagtcatcgattatgtagtgagtaaatatggagaa
gacagggtggcacagattattacttttggtacaatggctgccagggcggcgatacgtgat
gtaggacgagccctcaatatttcttatgccgatgtggacattatagccaagcagattcct
tttgagttggggatgaccattaatagagcccttgaagtgaatagcgacttgaaaaagatg
tatgactcggatgagcagggacggcagctcattgatacggcaatagcccttgaaggactg
cctcggcatgcctctacccatgctgccggtgtagtaatctctaaagagcccatatcaacg
tatgttcctttacagaaaaatgatgagagtattaccacccaatttcctatgggaacgcta
gaagaattagggcttctaaaaatggactttctgggcttaaggacattaacggtgattaga
gatgcgttaagcatgatccgtcagtccagaggactggatattgatatcaatagcataagt
tttgaagataaagaggtatttgagctattatgccagggcaataccgaaggtgtattccaa
ttggaaagcgcggggatgaagcagtttatgaaggaattgcagccgctatcgctggaagat
atcattgcgggaatatcattatatcgtcccggaccgatggaccagataccacgttatgta
agaaataaaaataatcctgaattaatcgcatataagcatcttctactggaaagtatcctg
gatgttacttacggttgtattgtttaccaggagcaggtaatgcaaattgttcgtgagctg
gggggctattctttaggaagagctgatctagtgagaagggcaatgtcaaagaagaaaaca
gatgtcatggagcaagaaaaaaataactttatctatggcattgtggatacaaacggagag
gttattgttccgggtgccatcagaaatggcgtggatgaacagacagccaaggaaatcttt
gatgaaatgatggactttgccaagtatgcctttaataaatcacatgctgccgcttatgca
gtgattgcatatcaaactgcctggttaaaatgtttttacccgacagagtttatggcagca
ctgcttaccagtgtattagacaacagtacaaaggtttcacaatatatacacgaatgcaag
aagatggggatcaagcttttgccgccggatattaacgaaagcagcgatacgtttactgtg
tcagagaacagtataaggttcggtatggcagcggtaaaaaatgtaggaaggaattttgtg
attgcggtaacccaagaaaggaataatgcaggactctttaaaagctttcgggatttttgt
gaaagaatgagtgaaaagggtatcaataaaagacttgtggaaagccttataaaatgcggt
gcatttgattcctttaaagtataccggtctcaattgatggcgacatatgaaagaatactg
gatggtattgcgcaaagtaaaaagaagaatatagaaggacagatttcgctgtttggcaac
gatgatcaacaggaacagacttttgccgtccatgatgaactgccgcagatgaatgagtat
ccgacaaaggtacttctttccatggagaaggaaatcatggggttgtatttatccggacac
cctcttgatcaataccagtcacaattgaaccaggttgtaacagcttcaactgccgatctt
catatgatacaggagaacttaggagagacaagcgcgcataaaggtcaaaggatattagga
gacggcacagaggtaatcttaggcggaattatcagtgcaaaaaaaacaaaaacaaccaag
agcaataatcttatggcttttgtaactttggaagactcttttggctctgtagaagtgatc
atatttcctaaaatacttgacaaatattcaaattatattatagaagataatgttgtaaca
ataaaaggaagaataagtgtaagagaagaagagcaacctaaaatattatgtgaagagatc
gtaccgtttaaaaagatcgaaaatcttaaaaagctgtatataaagatcgatggagagagc
agccatgtgttggaagaactatctcctgttctacagttttttaatggggatactcctgta
tatgtatattttgaaaaggataaaaaagtttcgttggcctcccgtgatttgtgggtgaaa
ttaagcgatcttttattagatgaattaagaaatattgtgggagatgacagcgttagagtg
gttgattgcagttaa
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