Petroclostridium sp. X23: QKW49_11440
Help
Entry
QKW49_11440 CDS
T09049
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
petr
Petroclostridium sp. X23
Pathway
petr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QKW49_11440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
petr03019
]
QKW49_11440
03009 Ribosome biogenesis [BR:
petr03009
]
QKW49_11440
Enzymes [BR:
petr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QKW49_11440
Messenger RNA biogenesis [BR:
petr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QKW49_11440
Ribosome biogenesis [BR:
petr03009
]
Prokaryotic type
rRNA helicases
QKW49_11440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF6702
AAA_19
Cas3-like_C_2
CdAMP_rec
SMC_N
CMS1
A-sol_ELP1
CbiQ
Motif
Other DBs
NCBI-ProteinID:
WHH61272
LinkDB
All DBs
Position
complement(2407583..2408860)
Genome browser
AA seq
425 aa
AA seq
DB search
MSTDFLTLGITSELNHILSQNGITEPTPIQVQAIPVLLEGKDIIGQAQTGTGKTLAFNLP
IMEQIDVNRSAIQALVITPTRELALQITGEAKKLALVKGVNILAAYGGQDVEQQVRKLKG
AIHMVIGTPGRLLDHLRRQTINFSQLEMLVLDEADQMLDMGFLKDVEQIIKQVSKKRQTM
LFSATMSKEIRSLANRYMQDPVQVRVKGKKITLDEIKQMVIETTDRGKQDALCKIIDEYR
PFMAIIFCRTKRRASALNEALQRRGYNSDELHGDLTQAKREKVMKAFRNAELQLLVATDV
AARGLDIEGVTHVFNYDIPQDAESYIHRIGRTGRAGQTGMAITFAAPKDRDTLNMIEKGI
NTSLERQKLVITTEQKFTREKQKQSDGKHRIDNKGRAPRNSNRKSGGLKKRGVSKGRTQK
NVRRG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgattttttaacccttggaattactagtgaattaaaccatatattaagccag
aatggtattacggagccgacaccgatacaggttcaggctattcctgtactcttggaagga
aaagatattataggacaggcccaaaccggtacggggaagacccttgcattcaatctgccg
atcatggagcaaattgatgtgaatagatctgctatacaggcattggttatcacacctacc
cgtgaattggcgcttcagattaccggggaagctaaaaaacttgccttggttaagggggta
aatatacttgctgcttatggaggtcaggatgtagaacagcaggtgcgcaagctgaagggc
gctattcatatggtaatcggtacaccgggacgcttattggaccacctacgacgtcaaact
ataaatttcagtcagcttgaaatgcttgtactagatgaagcggatcaaatgcttgatatg
ggatttttaaaagatgtagaacaaattattaaacaagtatccaaaaagcgccagactatg
ctattttccgcaacaatgtctaaggaaatccgttcgttggcgaacagatatatgcaagac
cctgttcaggtacgtgtaaaaggcaagaaaataacgcttgatgaaataaaacagatggtc
attgaaacaaccgacagaggaaaacaggatgccctttgtaaaataattgatgaatacaga
ccgttcatggcgattatcttctgccggaccaagcgccgagcaagtgcattgaatgaagca
ttgcaaagacggggatacaactcggatgaactgcatggtgacttgacgcaggcaaagcgc
gagaaagtaatgaaggcattcagaaatgcggagttacaacttctcgtggcaaccgatgtt
gcggcacgggggctggatatagaaggggtaacccatgtgtttaactatgatatcccgcaa
gatgcagaaagctatatccaccgtatcggacgtacgggacgtgccggccagacagggatg
gctatcacttttgctgcgccgaaagatcgggatacgttaaacatgatagagaaggggata
aatacatctttagaaagacaaaagcttgttataacaactgaacagaaatttaccagagaa
aaacaaaagcaaagtgacggtaagcacagaatagataataaaggaagagctccgagaaac
tcaaatagaaaatcgggcggacttaaaaaaagaggagtttcaaagggaaggacgcagaaa
aacgtcaggcggggatga
DBGET
integrated database retrieval system
