Petroclostridium sp. X23: QKW49_13000
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Entry
QKW49_13000 CDS
T09049
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
petr
Petroclostridium sp. X23
Pathway
petr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QKW49_13000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
petr03019
]
QKW49_13000
03009 Ribosome biogenesis [BR:
petr03009
]
QKW49_13000
Enzymes [BR:
petr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QKW49_13000
Messenger RNA biogenesis [BR:
petr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QKW49_13000
Ribosome biogenesis [BR:
petr03009
]
Prokaryotic type
rRNA helicases
QKW49_13000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Helicase_RecD
Cas3-like_C_2
AAA_30
Flavi_DEAD
Hyccin
UVR
Motif
Other DBs
NCBI-ProteinID:
WHH61554
LinkDB
All DBs
Position
complement(2730102..2731682)
Genome browser
AA seq
526 aa
AA seq
DB search
MLKLKFEDLNLSEEMNKAIADMGFEEASPIQSQAIPFVLEGRDVIGQAQTGTGKTAAFGI
PILEMVDAQSKKLQAVVLCPTRELAIQVAEEMKRLSKYKRGVEILPIYGGQPIDRQIKAL
RKGIQIIIGTPGRVMDHMRRKTLNMETVKMIILDEADEMLDMGFREDIETILEKVPEERQ
TILFSATIAKEIMELTKKYQNNPQIVKVVHKELTVPSIEQVYFEVKEKMKAEILCRLIDM
YNPKLSLVFCNTKKRVDDLVSALQIRGFFADSLHGDLKQNQRDKVMSKFRNGTIDILVAT
DVAARGIDVDDVEAVFNYDIPQDEEYYVHRIGRTGRAGRTGRAFTFVVGKEFYKLRDIQR
YTKTKIILQAVPSISDVQELKTSLFLEKVKDTIEKGHLSEYLHAVERLMEEDYTTLDIAA
ALLKMATTVENKQEEIEENYGDTGAAPGMVRLFINIGRNHRVGAKDIVGSIAGNTGISGN
LIGSIDIYDKYTFVEVPKEHAKEVLMSMKNNTIKGSKVNIEPANRK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagttaaaatttgaagatcttaatttgtccgaggagatgaataaagcaatagcc
gacatggggtttgaggaagcgtcacctattcagtcccaggctatcccgtttgttttagaa
ggcagagatgtgattggacaagcacaaaccggtacgggcaaaactgctgctttcggaatt
ccgattttagagatggtagatgctcaaagcaaaaaacttcaagcagtggttttgtgtcct
actagagaattggctattcaggttgccgaagagatgaaaaggctgtctaagtataaaaga
ggcgtagagattttgcctatatatggggggcaacccatagacaggcagatcaaagcgctt
agaaaaggcatacaaattattatcggtactcctggacgtgtaatggatcatatgagacgt
aaaacgttaaatatggaaactgtaaaaatgattattttagatgaagcggatgaaatgctg
gatatgggattcagagaggacatcgaaacaatattggaaaaggtgccggaagaaagacaa
acgatattgttttccgcaacgatagcaaaagaaatcatggagttaacaaaaaaatatcaa
aataaccctcagatcgtgaaggtagtacacaaggaattgactgttcctagtatcgagcag
gtatattttgaagtaaaagaaaagatgaaagcagaaattctctgcagattaattgatatg
tataatcctaagctgtctttggttttttgcaatactaagaaaagagtggatgacctggta
agtgccttgcaaataagaggcttctttgcggatagtttgcatggggatttgaaacaaaac
caaagagataaggtgatgagcaagtttagaaatggaaccattgatatccttgttgcaact
gatgtagctgcacgaggaattgatgttgatgatgtggaagctgttttcaattatgatatt
ccgcaggatgaagaatattatgtgcatagaattggaagaacaggtcgtgcgggaagaaca
ggccgcgcttttacatttgtagtaggcaaggaattttataagctcagagatattcagagg
tataccaaaacaaaaatcatacttcaagcggttccatctatcagcgatgtgcaagaatta
aagacaagcttattcttggaaaaagtgaaagatacaatagaaaaagggcatttaagtgaa
tatcttcatgcggttgagcggttaatggaagaggattatactactttagatattgcggca
gcattgctgaaaatggctacaactgttgaaaacaaacaagaggaaatcgaagaaaactat
ggggataccggtgccgctccggggatggtaagattgtttatcaatataggacgcaatcat
agggtcggagcaaaagatattgttgggagcattgccggcaatacagggatttccggcaac
ctgatcggaagtattgatatttacgataagtatacctttgtagaagtacccaaagaacat
gctaaagaagtattaatgagtatgaagaataatactattaaaggaagtaaagtaaatatt
gagcctgccaacaggaagtaa
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