Petroclostridium sp. X23: QKW49_13480
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Entry
QKW49_13480 CDS
T09049
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
petr
Petroclostridium sp. X23
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
petr03021
]
QKW49_13480
Transcription machinery [BR:
petr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QKW49_13480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
HTH_3
Sigma70_r4_2
HTH_11
HTH_23
HTH_10
HTH_17
HTH_31
HTH_DeoR
KORA
HTH_19
GntR
AbiEi_4
HTH_25
DUF134
HTH_37
HTH_50
HNF-1_N
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
WHH56863
LinkDB
All DBs
Position
complement(2845922..2846689)
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AA seq
255 aa
AA seq
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MTVVKEVNRLSHMSEEQLFEAYNQSKDKLIRELIINKYLYIAEILTKKFINRGLEFDDIY
QVACIGLIQAVERFDAEKGVKFSSFATPTIIGEIKRYFRDKGNIIRIPRRIYEIYQKVNQ
AKHVLSQELGRIPKVEEIAEYLNVSEETILEVIESANASAVQSLEQSVYSDDETALEQLV
GAEDATFAKIENRDFIEKSLNEFNEAEKEFIKQRYYNKRTQKQIAELLGVSQMYISRLER
KIIDKFKRLYYKSVN
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgacagtagtaaaggaagtaaacaggctgagtcatatgtcggaggaacagctatttgaa
gcatataatcaaagtaaagataaactgattagagagcttatcatcaataagtatctatat
attgcggaaattctcacaaaaaagttcataaatcgtggattagaattcgatgatatatat
caggtagcatgtatagggttaatacaagctgtggaacgcttcgatgcggaaaagggcgtg
aagttttcaagttttgccacgcccactattattggagagattaaaagatattttagagac
aaaggaaacattattagaattcccagaaggatttatgaaatatatcaaaaagttaatcaa
gcgaagcatgtactatcccaagagcttggtagaattcctaaagtagaagaaatcgcagaa
taccttaatgtttctgaagaaacgatacttgaagttatagaatcggccaatgccagcgct
gtgcagtctttagagcaatcagtatattccgatgatgaaacagcactcgaacagcttgta
ggcgcagaagatgctacgtttgctaaaattgagaatagggattttatagagaaaagtcta
aacgaattcaatgaggcggaaaaggaattcataaagcagcggtattataacaaaagaact
caaaagcaaatagccgaattgctcggagtatcccaaatgtatatatcaagattagaaaga
aaaattatagataaatttaagagattatattataaaagtgttaattga
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