Petroclostridium sp. X23: QKW49_16625
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Entry
QKW49_16625 CDS
T09049
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
petr
Petroclostridium sp. X23
Brite
KEGG Orthology (KO) [BR:
petr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
petr03400
]
QKW49_16625 (addA)
Enzymes [BR:
petr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QKW49_16625 (addA)
DNA repair and recombination proteins [BR:
petr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QKW49_16625 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_16
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
WHH57448
LinkDB
All DBs
Position
3529342..3533130
Genome browser
AA seq
1262 aa
AA seq
DB search
MNNQQINNKKKLPAVTWTPEQLAAITTSGCNLLVAAAAGSGKTAVLVERIIKKITDDKNP
VDIDRMLIVTFTNAAATEMRERIGAAIIKALEKKPESRQLQKQLTLLHKASITTIHSFCL
EVIRNNFHCIDLDPNFRIAHETETVLLKIEALEELFEERYQTDPIQPEFIRLVECYGGSI
DDSMLQDMVFALYDFVQSAPWPKMWLHQQAEAFNLPEHIDFAETAWGKVLMRSLRIELQG
FLNILKTAENIILQSEGLQPYHTNIVDDIHNINLLISKCAGTWDELYDAFTGTEFSRLAR
CGKEADKEKQEQVKNIRDEVKKRLKKVKEEVFCAISREITGDLRNLYPLMQCLCDLVMEF
DDRYAYKKKEKALVDFNDLEHFCLEILTGQDADGNMIPTKTAEDLQQRFEEILIDEYQDS
NMVQEVIMNVISRKNIDKPNIFMVGDVKQSIYRFRQARPELFLDKYMRYSGDEGMPERRI
RLYKNFRSRKEVIDGVNFIFQQMMSKDVGELEYDEVEALNFGAHFDSEESSDVSVGGPVE
LHLIDLKHDEDDRTFTQPNDDVEDEEMNEQEEEQPDQIQCEARIVAKRIKQLMSADETGT
VHKIYDKNAGGYRTVAFKDIIILLRTTRNWADIFVEELGMQGIPAYADTGTGYFKTVEIK
TMMSLLQIIDNPMQDIPLLSVLRSPIASFTPEELIDIRLVDKECSFYECMKKLSIEDSNQ
TAHKTQKFLDRLAHWRKNAGHMSTDELIWYLYTDTGYFSFVGVMPGGEQRQANLKILFER
ARQFEETSYKGLFNFINFINKLKSSRGDMGSAKILGENENVVRIMSIHKSKGLEFPVVFV
CGTGKQFNMQDMNKSILLHQDLGFGPEFVDHERRIAYPSVPKQALKYKIKLESLSEEMRI
LYVAFTRAKEKLIITGCIKGLEKTAAAWCKSLETIGAKLPEYEKMKAKSYLDWIGPIVVK
HKDGKLLRNTAGVDQEHALIDHDSTWDIKLWTKKDAMGIQQEMEQKEQELLQHLEQDAEA
EHGYYQDEIDKRLSWQYSYKVSEMLPTKMSVTELKRHFNAELADEYAMPIFIPTLIKKPL
FMEESKGLNAAERGSAMHFVMQHLKLDKIASVQELSQQLKEMVGMELLTEQQAGVVDVRK
IRRFFDSPLGQRLLNADEVNREIPFNIELKSTELHKELDEEIYGEESILLQGMIDCYFEE
QDELVLVDYKTDYVPDGDMDIIKERYRVQIEYYAKALESITCKRVKERYIYLFWNGETLS
MQ
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaccaacaaataaataataaaaagaaactccctgctgtcacctggacccctgaa
cagctggcggcaattactacatcgggctgcaacctgctggtcgcagctgctgcgggatca
ggaaagacagcggtacttgtagagagaattataaaaaaaataaccgatgacaaaaatccg
gttgatatagatagaatgctaatcgttacttttaccaatgccgccgctacggaaatgaga
gaaagaataggtgcggcgatcataaaggcactggagaaaaagccggaatcacggcagctg
caaaaacagcttacgctgctccataaagccagcatcaccacgatacattctttctgtctt
gaagtcataaggaataactttcactgtatagatctggacccgaattttcgtattgctcat
gaaacagaaacggtccttttgaaaatagaagcgctggaagaattatttgaagaacggtat
caaacagacccgatacagcctgagtttatacggttggtggaatgctatggcggaagtata
gatgacagcatgctgcaggatatggtctttgctttgtatgattttgtgcaaagcgcaccg
tggcctaaaatgtggctgcatcaacaagcggaagcgttcaatttgcctgagcatatagat
tttgcggaaactgcatggggaaaagtgcttatgcgtagtttgagaatagagctgcaaggt
tttttaaatattctgaaaacagcagagaatattatcctgcaatctgaaggcctgcagcca
taccataccaatattgtcgacgatattcataatatcaatttattgataagtaaatgcgca
ggtacatgggatgaactctatgacgcttttaccggtacggaattcagtagacttgcccga
tgcggaaaagaagctgacaaagagaaacaagaacaggtgaagaacatccgggatgaagta
aaaaaaagactgaagaaagtcaaagaagaggttttttgtgcgatttcccgggaaataacc
ggagatttgaggaatttgtaccctttgatgcagtgcctatgtgacctggtgatggaattt
gacgacagatatgcatataaaaagaaggaaaaagcacttgtcgatttcaatgacttggag
catttttgtctcgagatattgaccggtcaggatgcagacggaaatatgatccctacgaaa
acagcggaagatcttcaacagcgatttgaagaaattcttatcgatgaatatcaggacagc
aatatggtacaggaagttatcatgaatgtgatttctcgaaaaaatatcgataagcctaat
atctttatggtaggagatgtaaagcagagcatttacagattcagacaggcgaggccggaa
ctttttttggacaaatatatgcgttattccggtgatgaaggcatgcctgaaagaagaatc
cggttatataaaaatttcagaagccgaaaagaagtcatcgatggtgttaactttatattc
cagcagatgatgtcaaaagatgtgggtgagttggaatatgatgaagtcgaagcattaaac
tttggggcgcactttgattcggaggagagctcggacgtgagtgttggaggccctgtagaa
ttacatctgatagatttaaagcatgatgaggacgatagaacttttacccaacctaatgat
gatgtagaagatgaggaaatgaacgaacaggaagaagagcagccggaccagatacaatgt
gaggcgagaatcgtagcaaaaagaataaaacagcttatgtctgcggatgaaacagggacg
gtacataagatttatgataagaatgccggcggatatcggaccgtagcatttaaggatatc
attattttactacgtacaacacggaattgggcggatatctttgtggaagaactggggatg
cagggaatccctgcatatgcggatacgggaacgggttattttaaaacagtagaaatcaag
accatgatgtcgctgctgcaaattattgataatccgatgcaggatattcctttgctttca
gtactgcgatcccctatcgcgtcttttactccggaagagttaatcgatatccgtttagtg
gataaggaatgctctttttatgaatgcatgaaaaaactgagtatagaggattcgaatcag
acagcgcacaagacccaaaaattccttgatcgtcttgctcattggcgaaaaaatgccggg
catatgtccactgatgaactgatttggtatttatataccgatacgggctattttagtttt
gtaggtgttatgccgggaggggaacagcggcaggccaatttgaaaattctatttgaacgg
gcacgtcagtttgaagaaacaagctataaagggttattcaactttataaatttcatcaat
aaacttaaaagcagcagaggggatatggggagcgccaagatactgggtgaaaacgaaaat
gtagtgaggattatgagtatccacaaaagtaaggggttggaattccctgtggtttttgtt
tgcggaacagggaagcaatttaatatgcaggatatgaataaaagcatactgcttcaccag
gacttaggattcggccccgagtttgtagatcatgagagaaggattgcatatccttcggta
ccgaaacaggcattgaaatataaaattaagctggagagcctgtcggaagaaatgagaatc
ctttatgtggcctttaccagagccaaagaaaaattgatcatcaccggctgcataaaggga
ttggaaaaaactgcggcagcctggtgcaaaagtctggaaacaatcggcgcgaaactgccg
gagtatgaaaaaatgaaagcaaagagctaccttgattggatcggccctatcgttgtaaaa
cacaaagacggcaagctgttgaggaataccgccggagtggatcaagagcatgcattgata
gaccatgactctacatgggatataaaactgtggacgaaaaaagatgcgatgggtatacaa
caggagatggagcaaaaagagcaggagctgcttcagcatttggaacaagacgctgaagcg
gaacacgggtactatcaagacgagattgataaaagattaagctggcagtacagctataaa
gtttcggaaatgctgcccacaaagatgtcggtgacagaactgaaaaggcattttaacgct
gagctggccgatgaatacgctatgccgatttttatacctacgcttataaaaaaacctttg
ttcatggaagaaagcaaaggtcttaatgctgctgagaggggttccgccatgcactttgtg
atgcagcacttaaagctggacaagatcgcatcagtccaagaactctctcagcaattaaaa
gagatggtaggtatggaattacttaccgaacagcaggcaggtgtggtagatgtacgtaaa
atcagaagattttttgattcgccgttagggcagcggttgttaaatgcggatgaggtgaac
cgtgaaataccctttaatattgagctcaaaagtaccgagctgcataaagaactggatgaa
gagatttatggggaagaaagcatcttgcttcaaggaatgatagattgttattttgaagag
caggacgaacttgtgcttgtagattataaaacggattatgtacccgacggcgatatggat
ataataaaagaaagatacagggtacaaattgaatactatgccaaagcattggaaagcatt
acctgtaagagagtaaaagagagatatatctatttgttttggaacggagaaaccctttcg
atgcagtaa
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